PROJECT INFORMATION
GOLD Project ID
Gp0001693  
Project Name
Nodularia spumigena CCY9414  
Other Names
  
Legacy ER Project ID
11590  
Legacy GOLD ID
Gi00861  
NCBI BioProject Name Nodularia spumigena CCY9414
NCBI BioProject ID 13447
NCBI BioProject Accession PRJNA13447
NCBI Locus Tag
N  
NCBI BioSample Accession SAMN02436091
PI
Added By Nikos Kyrpides on 2007-11-27
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Marine Microbial Initiative (MMI)
Environmental
Sequencing Center J. Craig Venter Institute (JCVI) (USA)
Collaborating Institute Netherlands Institute of Ecology (NIOO-KNAW) (Netherlands)
Funding Agency Gordon and Betty Moore Foundation Marine Microbiology Initiative (USA)
Project Description
Planktonic, bloom-forming cyanobacterium; heterocystous gas-vacuolate N2-fixing, forms toxic surface blooms in brackish coastal seas. In summer Nodularia is a dominant organism that causes nuisance toxic blooms and is responsible for a large part of the new nitrogen input in this sea.  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Nodularia spumigena CCY9414
Organism Nodularia spumigena CCY9414
Analysis Projects Nodularia spumigena CCY9414
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
41  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0001693
Organism Name
Nodularia spumigena CCY9414  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
CYANOBACTERIA  
Genus
Nodularia  
Genus Synonyms
  
Species
Nodularia spumigena  
Subspecies
  
Species Synonyms
  
Strain
CCY9414  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 313624
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Cyanobacteria  
NCBI Class
  
NCBI Order
Nostocales  
NCBI Family
Aphanizomenonaceae  
NCBI Genus
Nodularia  
NCBI Species
Nodularia spumigena  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Filament-shaped  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Marine
Aquatic
Surface water
Metabolisms Nitrogen fixation
Phenotypes Bloom forming
Toxic
Energy Sources
  

 

 

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