PROJECT NAME
GOLD Project ID
Gp0001602  
Project Name
Mycobacterium abscessus CIP 104536  
Other Names
  
Legacy ER Project ID
11498  
Legacy GOLD ID
Gi00949, Gc00729  
NCBI BioProject Name Mycobacterium abscessus ATCC 19977
NCBI BioProject ID 15691
NCBI BioProject Accession
PRJNA15691  
NCBI Locus Tag
MAB  
NCBI BioSample Accession
SAMEA3138276  
PI Barbe V
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Human Pathogen
Medical
Sequencing Center CEA Genoscope (France)
Collaborating Institute
  
Funding Agency
  
Project Description
Environmental bacterium that causes lung, wound, and skin infections  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Taxonomy
Entrez
Database
  
Genome Publications PloS one 4(6):e5660 Non mycobacterial virulence genes in the genome of the emerging pathogen Mycobacterium abscessus.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Mycobacterium abscessus CIP 104536
Analysis Projects Mycobacterium abscessus CIP 104536
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
3-4Kb, 8-10Kb, 20Kb  
Number Of Reads
80000  
Read Size
  
Vector
  
GC Percent
64  
Chromosome Count
2  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0001602
Organism Name
Mycobacterium abscessus CIP 104536  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Mycobacterium  
Genus Synonyms
  
Species
Mycobacterium abscessus  
Subspecies
  
Species Synonyms
  
Strain
CIP 104536  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
CIP 104536  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.6333  
Exemplar Name
Mycobacterium abscessus  
Taxon DOI
10.1601/tx.6313  
Biosafety Level
2  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 36809
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinobacteria  
NCBI Order
Corynebacteriales  
NCBI Family
Mycobacteriaceae  
NCBI Genus
Mycobacterium  
NCBI Species
Mycobacterium abscessus  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Skin  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 152939
Genbank 16S ID X82235
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
37  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases Broncho-pulmonary infection
Respiratory infection
Wound infection
Known Habitats Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources Chemoorganotroph

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?