PROJECT INFORMATION
GOLD Project ID
Gp0001592  
Project Name
Methylobacterium extorquens AM1  
Other Names
  
Legacy ER Project ID
11488  
Legacy GOLD ID
Gi00369, Gc01036  
NCBI BioProject Name Methylobacterium extorquens AM1
NCBI BioProject ID 20
NCBI BioProject Accession PRJNA20
NCBI Locus Tag
MexAM1_META1p  
NCBI BioSample Accession SAMN02604258
PI
Added By Nikos Kyrpides on 2007-11-27
Last Modified By JGI automated process on 2014-05-20
Project Comments
  
Project Status
Complete and Published  
Project Relevance Biotechnological
Methanol production
Sequencing Center University of Washington (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Methanol-utilizing bacterium  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information Entrez
Taxonomy
ATCC
Database
  
Genome Publications PloS one 4(5):e5584 Methylobacterium genome sequences: a reference blueprint to investigate microbial metabolism of C1 compounds from natural and industrial sources.
Other Publications
  
PROJECT COMPOSITION
Study Methylobacterium extorquens AM1
Analysis Projects Methylobacterium extorquens AM1
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
3Kb, 10Kb, 25Kb  
Number Of Reads
132942  
Read Size
  
Vector
pUC19, pFOS1  
GC Percent
68  
Chromosome Count
1  
Plasmid Count
4  
ORGANISM NAME
GOLD Organism ID Go0001592
Organism Name
Methylobacterium extorquens AM1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Methylobacterium  
Genus Synonyms
  
Species
Methylobacterium extorquens  
Subspecies
  
Species Synonyms
  
Strain
AM1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 14718  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 272630
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhizobiales  
NCBI Family
Methylobacteriaceae  
NCBI Genus
Methylorubrum  
NCBI Species
Methylorubrum extorquens  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Air  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 122729
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
25 - 30  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Pairs
Diseases None
Known Habitats Air
Metabolisms
  
Phenotypes
  
Energy Sources Methylotroph

 

 

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