PROJECT INFORMATION
GOLD Project ID
Gp0001516  
Project Name
Histophilus somni 2336  
Other Names
  
Legacy ER Project ID
11419  
Legacy GOLD ID
Gi00287, Gc00743  
NCBI BioProject Name Haemophilus somnus 2336
NCBI BioProject ID 388
NCBI BioProject Accession PRJNA388
NCBI Locus Tag
HSM  
NCBI BioSample Accession SAMN02598524
PI Inzana, Thomas
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
Project Status
Complete and Published  
Project Relevance Animal Pathogen
Human Pathogen
Medical
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute University of Oklahoma (USA)
Virginia Polytechnic Institute and State University (USA)
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Causes pneumonia, arthritis, myocarditis, and reproductive problems  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Taxonomy
DOE Joint Genome Institute
Entrez
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Haemophilus somnus V
Analysis Projects Histophilus somni 2336
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
  
Number Of Reads
26472  
Read Size
  
Vector
  
GC Percent
37  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0001516
Organism Name
Histophilus somni 2336  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Histophilus  
Genus Synonyms
Haemophilus  
Species
Histophilus somni  
Subspecies
  
Species Synonyms
  
Strain
2336  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 228400
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Pasteurellales  
NCBI Family
Pasteurellaceae  
NCBI Genus
Histophilus  
NCBI Species
Histophilus somni  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Mammals  
Ecosystem Type
Respiratory system  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
35 - 37  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases Pneumonia
Arthritis
Myocarditis
Known Habitats Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

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