PROJECT INFORMATION
GOLD Project ID
Gp0001490  
Project Name
Gluconacetobacter diazotrophicus PA1 5  
Other Names
  
Legacy ER Project ID
11394  
Legacy GOLD ID
Gi00277, Gc00695  
NCBI BioProject Name Gluconacetobacter diazotrophicus PAl 5
NCBI BioProject ID 377
NCBI BioProject Accession PRJNA377
NCBI Locus Tag
GDI  
NCBI BioSample Accession SAMEA3138270
PI Ferreira PCG
Added By Nikos Kyrpides on 2007-11-27
Last Modified By JGI automated process on 2014-05-20
Project Comments
  
Project Status
Complete and Published  
Project Relevance Agricultural
Sequencing Center Laboratorio Nacional de Computacao Cientifica (Brazil)
ANRT (France)
Collaborating Institute
  
Funding Agency The Brazilian National Council for Scientific and Technological Development (CNPq) (Brazil)
FAPERJ (Brazil)
Project Description
Nitrogen-fixing plant symbiont  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information Taxonomy
Entrez
Kennedy's Lab
Database
  
Genome Publications BMC genomics 10(450):450 Complete genome sequence of the sugarcane nitrogen-fixing endophyte Gluconacetobacter diazotrophicus Pal5.
Other Publications
  
PROJECT COMPOSITION
Study Gluconacetobacter diazotrophicus PAl 5, DSM 5601
Analysis Projects Gluconacetobacter diazotrophicus PA1 5
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
66  
Chromosome Count
1  
Plasmid Count
2  
ORGANISM NAME
GOLD Organism ID Go0001491
Organism Name
Gluconacetobacter diazotrophicus PA1 5  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Gluconacetobacter  
Genus Synonyms
  
Species
Gluconacetobacter diazotrophicus  
Subspecies
  
Species Synonyms
  
Strain
PA1 5  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 49037  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.865  
Exemplar Name
Gluconacetobacter diazotrophicus  
Taxon DOI
10.1601/tx.914  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 272568
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhodospirillales  
NCBI Family
Acetobacteraceae  
NCBI Genus
Gluconacetobacter  
NCBI Species
Gluconacetobacter diazotrophicus  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Rhizoplane  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 113652
Genbank 16S ID X75618
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
30  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Symbiotic
Symbiotic Physical Interaction
  
Symbiotic Relationship
Mutualistic  
Symbiont Name
Sugarcane  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases None
Known Habitats Host
Metabolisms Nitrogen fixation
Phenotypes Acetic-acid
Energy Sources Diazotroph

 

 

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