PROJECT NAME
GOLD Project ID
Gp0001421  
Project Name
Escherichia coli DH10B  
Other Names
  
Legacy ER Project ID
11325  
Legacy GOLD ID
Gi00237, Gc00716  
NCBI BioProject Name Escherichia coli str. K-12 substr. DH10B
NCBI BioProject ID 20079
NCBI BioProject Accession
PRJNA20079  
NCBI Locus Tag
ECDH  
NCBI BioSample Accession
SAMN02604262  
PI George Weinstock
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Human Pathogen
Medical
Sequencing Center Baylor College of Medicine
Collaborating Institute University of Wisconsin, Madison (USA)
Funding Agency NIH (USA)
Project Description
Non-Pathogen, Laboratory, ECOR group: A  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
Wikipedia
Taxonomy
Database
  
Genome Publications Journal of bacteriology 190(7):2597-606 The complete genome sequence of Escherichia coli DH10B: insights into the biology of a laboratory workhorse.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Escherichia coli DH10B
Analysis Projects Escherichia coli DH10B
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
  
Number Of Reads
183803  
Read Size
  
Vector
  
GC Percent
51  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0001421
Organism Name
Escherichia coli DH10B  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Escherichia  
Genus Synonyms
  
Species
Escherichia coli  
Subspecies
  
Species Synonyms
  
Strain
DH10B  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
KCTC 12020  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 316385
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Enterobacteriales  
NCBI Family
Enterobacteriaceae  
NCBI Genus
Escherichia  
NCBI Species
Escherichia coli  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Lab synthesis  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 319919
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
37  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Pairs
Singles
Diseases None
Known Habitats Host
Human intestinal microflora
Metabolisms
  
Phenotypes Non-Pathogen
Energy Sources
  

 

 

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