PROJECT INFORMATION
GOLD Project ID
Gp0001381  
Project Name
Edwardsiella ictaluri 93-146  
Other Names
  
Legacy ER Project ID
11286  
Legacy GOLD ID
Gi00212, Gc01019  
NCBI BioProject Name Edwardsiella ictaluri 93-146
NCBI BioProject ID 34853
NCBI BioProject Accession PRJNA34853
NCBI Locus Tag
NT01EI  
NCBI BioSample Accession SAMN02603942
PI Lawrence M
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
Project Status
Complete and Published  
Project Relevance Fish Pathogen
Medical
Sequencing Center Mississippi State University (USA)
University of Oklahoma (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Agriculture (France)
Project Description
This strain will be used for comparative genome analysis  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information Entrez
Taxonomy
Database
  
Genome Publications Journal of bacteriology 194(3):740-1 Genome sequence of Edwardsiella ictaluri 93-146, a strain associated with a natural channel catfish outbreak of enteric septicemia of catfish.
Other Publications
  
PROJECT COMPOSITION
Study Edwardsiella ictaluri 93-146
Analysis Projects Edwardsiella ictaluri 93-146
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
57  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0001381
Organism Name
Edwardsiella ictaluri 93-146  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Edwardsiella  
Genus Synonyms
  
Species
Edwardsiella ictaluri  
Subspecies
  
Species Synonyms
  
Strain
93-146  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 634503
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Enterobacterales  
NCBI Family
Hafniaceae  
NCBI Genus
Edwardsiella  
NCBI Species
Edwardsiella ictaluri  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Fish  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Septicemia
Enteric septicemia
Known Habitats Aquatic
Host
Fresh water
Ponds
Metabolisms
  
Phenotypes Pathogen
Energy Sources Heterotroph

 

 

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