PROJECT NAME
GOLD Project ID
Gp0001374  
Project Name
Desulfitobacterium hafniense DCB-2  
Other Names
  
Legacy ER Project ID
11280  
Legacy GOLD ID
Gi00192, Gc00918  
NCBI BioProject Name Desulfitobacterium hafniense DCB-2
NCBI BioProject ID 205
NCBI BioProject Accession
PRJNA205  
NCBI Locus Tag
Dhaf  
NCBI BioSample Accession
SAMN02598433  
PI James Tiedje
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Bioremediation
Environmental
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Michigan State University (USA)
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Degrades chlorinated pollutants  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Entrez
Image
Taxonomy
Database
  
Genome Publications BMC microbiology 12(21):21 Genome sequence of Desulfitobacterium hafniense DCB-2, a Gram-positive anaerobe capable of dehalogenation and metal reduction.
Other Publications
  
PROJECT COMPOSITION
Studies Desulfitobacterium hafniense DCB-2 DSM 10664
Analysis Projects Desulfitobacterium hafniense DCB-2
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
48  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0001374
Organism Name
Desulfitobacterium hafniense DCB-2  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Desulfitobacterium  
Genus Synonyms
  
Species
Desulfitobacterium hafniense  
Subspecies
  
Species Synonyms
  
Strain
DCB-2  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 10664  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.4321  
Exemplar Name
Desulfitobacterium hafniense  
Taxon DOI
10.1601/tx.4321  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 272564
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Clostridia  
NCBI Order
Clostridiales  
NCBI Family
Peptococcaceae  
NCBI Genus
Desulfitobacterium  
NCBI Species
Desulfitobacterium hafniense  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Wastewater  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 162105
Genbank 16S ID X94975
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Sporulating  
Temperature Range
Mesophile  
Temperature Optimum
37 - 38  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Chains
Pairs
Singles
Diseases None
Known Habitats Sludge
Wastewater
Metabolisms Degrades pollutants
Phenotypes
  
Energy Sources
  

 

 

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