PROJECT NAME
GOLD Project ID
Gp0001346  
Project Name
Staphylococcus aureus D30  
Other Names
  
Legacy ER Project ID
11250  
Legacy GOLD ID
Gi02279  
NCBI BioProject Name Staphylococcus aureus D30
NCBI BioProject ID 19993
NCBI BioProject Accession PRJNA19993
NCBI Locus Tag
SAD30  
NCBI BioSample Accession SAMN02471356
PI Sivaraman K,
Added By Nikos Kyrpides on 2007-11-27
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Human Pathogen
Medical
Sequencing Center University of Central Florida
Collaborating Institute
  
Funding Agency
  
Project Description
Isolated from nares of a healthy human  
Project Information Visibility Public
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications BMC genomics 9(433):433 Genome sequencing and analysis reveals possible determinants of Staphylococcus aureus nasal carriage.
Other Publications
  
PROJECT COMPOSITION
Study Staphylococcus aureus D30
Analysis Projects Staphylococcus aureus D30
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
33  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0001346
Organism Name
Staphylococcus aureus D30  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Staphylococcus  
Genus Synonyms
  
Species
Staphylococcus aureus  
Subspecies
  
Species Synonyms
  
Strain
D30  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 455227
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Bacillales  
NCBI Family
Staphylococcaceae  
NCBI Genus
Staphylococcus  
NCBI Species
Staphylococcus aureus  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Respiratory system  
Ecosystem Subtype
Nasopharyngeal  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Coccus-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
30 - 37  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Clusters
Diseases Staphylococcal scarlet fever
Toxic-shock syndrome
Nosocomial infection
Known Habitats Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources Heterotroph

 

 

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