PROJECT INFORMATION
GOLD Project ID
Gp0001333  
Project Name
Chthoniobacter flavus Ellin428  
Other Names
  
Legacy ER Project ID
11238  
Legacy GOLD ID
Gi01672  
NCBI BioProject Name Chthoniobacter flavus Ellin428
NCBI BioProject ID 28531
NCBI BioProject Accession PRJNA28531
NCBI Locus Tag
CfE428  
NCBI BioSample Accession SAMN00000678
PI Thomas M. Schmidt
Added By Nikos Kyrpides on 2007-11-27
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Evolution
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Common soil bacterium  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Genome Publications Journal of bacteriology 193(11):2902-3 Genome sequence of Chthoniobacter flavus Ellin428, an aerobic heterotrophic soil bacterium.

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Verrucomicrobia, 5 species Proposal # 0087-060710
Organism Chthoniobacter flavus Ellin428
Analysis Projects Chthoniobacter flavus Ellin428
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
61  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0001333
Organism Name
Chthoniobacter flavus Ellin428  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
VERRUCOMICROBIA  
Genus
Chthoniobacter  
Genus Synonyms
  
Species
Chthoniobacter flavus  
Subspecies
  
Species Synonyms
  
Strain
Ellin428  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.25462  
Exemplar Name
Chthoniobacter flavus  
Taxon DOI
10.1601/tx.25462  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 497964
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Verrucomicrobia  
NCBI Class
Spartobacteria  
NCBI Order
Chthoniobacterales  
NCBI Family
Chthoniobacteraceae  
NCBI Genus
Chthoniobacter  
NCBI Species
Chthoniobacter flavus  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
Yellow  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Pairs
Diseases None
Known Habitats Soil
Metabolisms
  
Phenotypes
  
Energy Sources Heterotroph

 

 

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