PROJECT NAME
GOLD Project ID
Gp0001323  
Project Name
Chlorobium limicola DSM 245  
Other Names
  
Legacy ER Project ID
11229  
Legacy GOLD ID
Gi00145, Gc00814  
NCBI BioProject Name Chlorobium limicola DSM 245
NCBI BioProject ID 12606
NCBI BioProject Accession
PRJNA12606  
NCBI Locus Tag
Clim  
NCBI BioSample Accession
SAMN02598270  
PI Donald A. Bryant
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Energy production
Hydrogen production
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
A green sulfur bacterium used to model the reductive carbolic acid cycle.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Entrez
Taxonomy
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Studies Chlorobia, 8 species
Analysis Projects Chlorobium limicola DSM 245
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
51  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0001323
Organism Name
Chlorobium limicola DSM 245  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
CHLOROBI  
Genus
Chlorobium  
Genus Synonyms
  
Species
Chlorobium limicola  
Subspecies
  
Species Synonyms
  
Strain
DSM 245  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 245  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.782  
Exemplar Name
Chlorobium limicola  
Taxon DOI
10.1601/tx.782  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 290315
NCBI Kingdom
  
NCBI Phylum
Chlorobi  
NCBI Class
Chlorobia  
NCBI Order
Chlorobiales  
NCBI Family
Chlorobiaceae  
NCBI Genus
Chlorobium  
NCBI Species
Chlorobium limicola  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Thermal springs  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 156529
Genbank 16S ID Y10113
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Chains
Singles
Diseases None
Known Habitats Aquatic
Fresh water
Hot spring
Metabolisms
  
Phenotypes Green sulfur
Energy Sources Photoautotroph
Photosynthetic

 

 

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