PROJECT NAME
GOLD Project ID
Gp0001241  
Project Name
Beijerinckia indica indica ATCC 9039  
Other Names
  
Legacy ER Project ID
11135  
Legacy GOLD ID
Gi01551, Gc00766  
NCBI BioProject Name Beijerinckia indica subsp. indica ATCC 9039
NCBI BioProject ID 20841
NCBI BioProject Accession
PRJNA20841  
NCBI Locus Tag
Bind  
NCBI BioSample Accession
SAMN02598441  
PI Peter Dunfield
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biopolymer production
Biotechnological
Oil industry
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Bioploymer-producing strain.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Information
Taxonomy
Entrez
Database
  
Genome Publications Journal of bacteriology 192(17):4532-3 Complete genome sequence of Beijerinckia indica subsp. indica.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Obligate methanotrophy CSP_777358
Analysis Projects Beijerinckia indica indica ATCC 9039
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Library Method (MIGS-28)
3-kb, 8-kb, and 40-kb  
Number Of Reads
33870  
Read Size
  
Vector
  
GC Percent
57  
Chromosome Count
1  
Plasmid Count
2  
ORGANISM NAME
GOLD Organism ID Go0001241
Organism Name
Beijerinckia indica indica ATCC 9039  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Beijerinckia  
Genus Synonyms
Azotobacter  
Species
Beijerinckia indica  
Subspecies
indica  
Species Synonyms
  
Strain
ATCC 9039  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 9039  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.1444  
Exemplar Name
Beijerinckia indica  
Taxon DOI
10.1601/tx.10631  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 395963
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhizobiales  
NCBI Family
Beijerinckiaceae  
NCBI Genus
Beijerinckia  
NCBI Species
Beijerinckia indica  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 5269
Genbank 16S ID M59060
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
20-30  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases None
Known Habitats Soil
Metabolisms Nitrogen fixation
Phenotypes Nonmethanotrophic
Energy Sources Chemoorganotroph

 

 

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