PROJECT NAME
GOLD Project ID
Gp0001238  
Project Name
Beggiatoa alba B18LD  
Other Names
  
Legacy ER Project ID
11131  
Legacy GOLD ID
Gi01563  
NCBI BioProject Name Beggiatoa alba B18LD
NCBI BioProject ID 62137
NCBI BioProject Accession
PRJNA62137  
NCBI Locus Tag
Begal  
NCBI BioSample Accession
SAMN02261399  
PI Jochen Mueller
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Biochemical
Biotechnological
Ecological
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Beggiatoa alba B18LD genome sequencing  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Information
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Studies CSP_777009
Analysis Projects Beggiatoa alba B18LD
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 3: Improved-High-Quality Draft
Finishing Goal Level 3: Improved-High-Quality Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX-Titanium
Illumina GAii
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
41  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0001238
Organism Name
Beggiatoa alba B18LD  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Beggiatoa  
Genus Synonyms
  
Species
Beggiatoa alba  
Subspecies
  
Species Synonyms
  
Strain
B18LD  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 33555  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.2289  
Exemplar Name
Beggiatoa alba  
Taxon DOI
10.1601/tx.2289  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 395493
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Thiotrichales  
NCBI Family
Thiotrichaceae  
NCBI Genus
Beggiatoa  
NCBI Species
Beggiatoa alba  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Agricultural field  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AF110274
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Soil
Metabolisms Sulfur oxidizer
Phenotypes
  
Energy Sources
  

 

 

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