PROJECT NAME
GOLD Project ID
Gp0001211  
Project Name
Cryptobacterium curtum 12-3, DSM 15641  
Other Names
  
Legacy ER Project ID
11102  
Legacy GOLD ID
Gi02234, Gc01086  
NCBI BioProject Name Cryptobacterium curtum DSM 15641
NCBI BioProject ID 20739
NCBI BioProject Accession
PRJNA20739  
NCBI Locus Tag
CCUR  
NCBI BioSample Accession
SAMN02598434  
PI Jonathan Eisen
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-05-20
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance GEBA
Human Pathogen
Medical
Tree of Life
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Leibniz Institute (Germany)
Funding Agency Leibniz Institute (Germany)
U.S. Department of Energy (DOE) (USA)
Project Description
A periodontal disease-causing bacterium  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information GEBA
Isolation
Wikipedia
Database
  
Genome Publications Standards in genomic sciences 1(2):93-100 Complete genome sequence of Cryptobacterium curtum type strain (12-3).
Other Publications
  
PROJECT COMPOSITION
Studies A Genomic Encyclopedia of Bacteria and Archaea (GEBA)
Analysis Projects Cryptobacterium curtum 12-3, DSM 15641
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX
Sanger
Library Method (MIGS-28)
8Kb, Fosmid  
Number Of Reads
  
Read Size
  
Vector
pMCL200, pcc1Fos  
GC Percent
51  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0001211
Organism Name
Cryptobacterium curtum 12-3, DSM 15641  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Cryptobacterium  
Genus Synonyms
  
Species
Cryptobacterium curtum  
Subspecies
  
Species Synonyms
  
Strain
12-3T, DSM 15641  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 15641  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.5750  
Exemplar Name
Cryptobacterium curtum  
Taxon DOI
10.1601/tx.5750  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 469378
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Coriobacteriia  
NCBI Order
Eggerthellales  
NCBI Family
Eggerthellaceae  
NCBI Genus
Cryptobacterium  
NCBI Species
Cryptobacterium curtum  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Oral  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 302365
Genbank 16S ID AB019260
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Obligate anaerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
37  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Clusters
Singles
Diseases Caries
Periodontal infection
Known Habitats Host
Human
Human oral cavity
Metabolisms
  
Phenotypes
  
Energy Sources
  
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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