PROJECT NAME
GOLD Project ID
Gp0001182  
Project Name
Brachyspira murdochii 56-150, DSM 12563  
Other Names
  
Legacy ER Project ID
11067  
Legacy GOLD ID
Gi02313, Gc01276  
NCBI BioProject Name Brachyspira murdochii DSM 12563
NCBI BioProject ID 29543
NCBI BioProject Accession
PRJNA29543  
NCBI Locus Tag
Bmur  
NCBI BioSample Accession
SAMN00001910  
PI Jonathan Eisen
Added By GEBA on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance GEBA
Tree of Life
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Leibniz Institute (Germany)
Funding Agency Leibniz Institute (Germany)
U.S. Department of Energy (DOE) (USA)
Project Description
Swine intestine spirochete  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information GEBA
Isolation
Database
  
Genome Publications Standards in genomic sciences 2(3):260-9 Complete genome sequence of Brachyspira murdochii type strain (56-150).
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies A Genomic Encyclopedia of Bacteria and Archaea (GEBA)
Analysis Projects Brachyspira murdochii 56-150, DSM 12563
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Sanger
Library Method (MIGS-28)
6Kb, 8Kb, fosmid, 454  
Number Of Reads
79829 Sanger, 861386 pyrosequencing  
Read Size
  
Vector
pMCL200  
GC Percent
28  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0001182
Organism Name
Brachyspira murdochii 56-150, DSM 12563  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
SPIROCHAETES  
Genus
Brachyspira  
Genus Synonyms
Serpulina  
Species
Brachyspira murdochii  
Subspecies
  
Species Synonyms
  
Strain
56-150, DSM 12563  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 12563  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.7884  
Exemplar Name
Brachyspira murdochii  
Taxon DOI
10.1601/tx.9797  
Biosafety Level
2  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 526224
NCBI Kingdom
  
NCBI Phylum
Spirochaetes  
NCBI Class
Spirochaetia  
NCBI Order
Brachyspirales  
NCBI Family
Brachyspiraceae  
NCBI Genus
Brachyspira  
NCBI Species
Brachyspira murdochii  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Animal  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AY312492
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Spiral-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
39  
Salinity
  
pH
  
Cell Diameter
0.35 - 0.4 um  
Cell Length
5 - 8 um  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Host
Pig
Metabolisms
  
Phenotypes
  
Energy Sources Chemoorganotroph
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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