PROJECT NAME
GOLD Project ID
Gp0001131  
Project Name
Clostridium innocuum JCM 1292  
Other Names
  
Legacy ER Project ID
11017  
Legacy GOLD ID
Gi02190  
NCBI BioProject Name
  
NCBI BioProject ID
  
NCBI BioProject Accession
  
NCBI Locus Tag
  
NCBI BioSample Accession
  
PI Hattori M
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Nikos Kyrpides on 2011-09-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
incomplete  
Project Relevance Human Microbiome Project (HMP)
Medical
Sequencing Center
  
Collaborating Institute University of Tokyo (Switzerland)
Funding Agency
  
Project Description
  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Taxonomy
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Human Microbiome Project (HMP) Reference Genomes
Analysis Projects
  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31)
Finishing Goal Level 2: High-Quality Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0001131
Organism Name
Clostridium innocuum JCM 1292  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Clostridium  
Genus Synonyms
  
Species
Clostridium innocuum  
Subspecies
  
Species Synonyms
  
Strain
JCM 1292  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
JCM 1292  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.3953  
Exemplar Name
Clostridium innocuum  
Taxon DOI
10.1601/tx.3953  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1522
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Erysipelotrichia  
NCBI Order
Erysipelotrichales  
NCBI Family
Erysipelotrichaceae  
NCBI Genus
Erysipelatoclostridium  
NCBI Species
[Clostridium] innocuum  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Skin  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID M23732
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
  
Motility
Motile  
Sporulation
Sporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Pairs
Singles
Diseases None
Known Habitats Host
Human intestinal microflora
Metabolisms
  
Phenotypes Commensal
Energy Sources Chemoorganotroph
HMP METADATA
HMP ID
927  
Show in DACC?
Yes  
HMP Project Status
In Progress  
BEI Status
  
NCBI Submission Status
0. project has not been submitted to NCBI  
Isolate Suggestion Source
  
HMP Isolation Body Sample Site
Gastrointestinal tract  
HMP Isolation Body Sample Subsite
  
HMP Finishing Goal
  
Source, Sample & Medical Relevance Comments
  
Isolate Availability Comments
  
Project Comments
  
DNA Received
  
Date DNA Received
  
Date Sequencing Begins
  
Date Draft Sequencing Completed
  
Cross Reference ID
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?