PROJECT NAME
GOLD Project ID
Gp0001119  
Project Name
Amphibacillus xylanus NBRC 15112  
Other Names
  
Legacy ER Project ID
11001  
Legacy GOLD ID
Gi02036, Gc0011001  
NCBI BioProject Name Amphibacillus xylanus NBRC 15112
NCBI BioProject ID 42371
NCBI BioProject Accession
PRJNA42371  
NCBI Locus Tag
AXY  
NCBI BioSample Accession
  
PI Fujita N
Added By Nikos Kyrpides on 2007-11-27 00:00:00.0
Last Modified By Auto script update processes on 2014-05-20 00:00:00.0
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance
  
Sequencing Center National Institute of Technology and Evaluation (Japan)
Collaborating Institute
  
Funding Agency
  
Project Description
Amphibacillus xylanus NBRC 15112 Genome sequencing  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Amphibacillus xylanus NBRC 15112
Analysis Projects Amphibacillus xylanus NBRC 15112
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
36  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0001119
Organism Name
Amphibacillus xylanus NBRC 15112  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Amphibacillus  
Genus Synonyms
  
Species
Amphibacillus xylanus  
Subspecies
  
Species Synonyms
  
Strain
NBRC 15112  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
NBRC 15112  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.5009  
Exemplar Name
Amphibacillus xylanus  
Taxon DOI
10.1601/tx.5009  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 698758
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Bacillales  
NCBI Family
Bacillaceae  
NCBI Genus
Amphibacillus  
NCBI Species
Amphibacillus xylanus  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Solid waste  
Ecosystem Type
Composting  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AJ496807
Synonym List
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Sporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
8 - 10  
Cell Diameter
0.3 - 0.5 um  
Cell Length
0.9 - 1.9 um  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats
  
Metabolisms Xylan degrader
Phenotypes Alkaliphile
Energy Sources
  

 

 

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