PROJECT INFORMATION | |
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GOLD Project ID
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Gp0001117
|
Project Name
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Kitasatospora setae KM-6054, NBRC 14216
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Other Names
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Legacy ER Project ID
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10999
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Legacy GOLD ID
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Gi01853, Gc01542
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NCBI BioProject Name | Kitasatospora setae KM-6054 |
NCBI BioProject ID
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19951 |
NCBI BioProject Accession
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PRJDA19951 |
NCBI Locus Tag
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KSE
|
NCBI BioSample Accession
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|
PI | Fujita N |
Added By |
Nikos Kyrpides
on 2007-11-27 |
Last Modified By |
Jon Bertsch
on 2014-04-08 |
Project Comments |
|
Project Status
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Complete and Published
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Project Relevance
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Antibiotic production Biotechnological |
Sequencing Center
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National Institute of Technology and Evaluation
(Japan)
|
Collaborating Institute
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|
Funding Agency
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|
Project Description
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produce setamycin (bafilomycin B1) possessing antitrichomonal activity
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Project Information Visibility
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Public |
PROJECT TYPE | |
Specimen
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Organism |
Nucleic Acid
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DNA |
Sequencing Strategy
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Whole Genome Sequencing
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EXTERNAL PROJECT LINKS | |
Project Information
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|
Database
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|
Genome Publications
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DNA research : an international journal for rapid publication of reports on genes and genomes
17(6):393-406
Genome sequence of Kitasatospora setae NBRC 14216T: an evolutionary snapshot of the family Streptomycetaceae.
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Other Publications
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PROJECT COMPOSITION | |
Study |
Kitasatospora setae KM-6054, NBRC 14216 |
Organism |
Kitasatospora setae KM-6054, NBRC 14216 |
Analysis Projects |
Kitasatospora setae KM-6054, NBRC 14216 |
Number of Analysis Projects |
1 |
Number of DAPs |
0
|
SEQUENCING INFORMATION | |
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Sequencing Status
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Complete |
Sequencing Quality (MIGS-31) |
Level 6: Finished |
Finishing Goal
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Sequencing Comments
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Sequencing Technology
(MIGS-29)
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Sanger |
Library Method
(MIGS-28)
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1.6, 6.5 and 37 kb inserts
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Number Of Reads
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50400
|
Read Size
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|
Vector
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pUC118 (TaKaRa), pCC1FOS (EPICENTRE)
|
GC Percent |
74
|
Chromosome Count |
1
|
Plasmid Count |
0
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ORGANISM NAME | |
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GOLD Organism ID |
Go0001117 |
Organism Name |
Kitasatospora setae KM-6054, NBRC 14216
|
Other names (alias, synonyms, short names, common names) |
|
Organism Domain |
BACTERIAL
|
Phylogeny |
ACTINOBACTERIA
|
Genus |
Kitasatospora
|
Genus Synonyms |
|
Species |
Kitasatospora setae
|
Subspecies |
|
Species Synonyms |
|
Strain |
KM-6054, NBRC 14216, DSM 43861
|
Strain Synonyms |
|
Serovar-Biovar |
|
Culture Collection ID |
NBRC 14216
|
Type Strain |
Yes
|
Exemplar DOI |
10.1601/ex.7265
|
Exemplar Name |
Streptomyces setae
|
Taxon DOI |
10.1601/tx.7265
|
Biosafety Level |
1
|
Organism Comments |
|
Cultured |
Yes
|
Culture Type |
Isolate
|
Organism Type |
Natural
|
Uncultured Type |
|
Commercial Strain |
|
Commercial Strain Comments |
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ORGANISM TAXONOMY
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|
NCBI Taxonomy ID |
452652 |
NCBI Superkingdom |
Bacteria
|
NCBI Kingdom |
|
NCBI Phylum |
Actinobacteria
|
NCBI Class |
Actinobacteria
|
NCBI Order |
Streptomycetales
|
NCBI Family |
Streptomycetaceae
|
NCBI Genus |
Kitasatospora
|
NCBI Species |
Kitasatospora setae
|
ISOLATION CLASSIFICATION | |
Ecosystem |
Environmental
|
Ecosystem Category |
Terrestrial
|
Ecosystem Type |
Soil
|
Ecosystem Subtype |
Unclassified
|
Specific Ecosystem |
Unclassified
|
ORGANISM EXTERNAL REFERENCES | |
Strain Info ID |
|
Genbank 16S ID |
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GENERAL PROPERTIES | |
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Oxygen Requirement |
Aerobe
|
Cell Shape |
|
Motility |
|
Sporulation |
Sporulating
|
Temperature Range |
Mesophile
|
Temperature Optimum |
|
Salinity |
|
pH |
|
Cell Diameter |
|
Cell Length |
|
Color |
|
Gram Staining |
Gram+
|
Biotic Relationships | Free living |
Symbiotic Physical Interaction |
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Symbiotic Relationship |
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Symbiont Name |
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Symbiont Taxon ID |
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Cell Arrangements |
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Diseases |
None |
Known Habitats |
Soil |
Metabolisms |
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Phenotypes |
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Energy Sources |
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