PROJECT NAME
GOLD Project ID
Gp0001117  
Project Name
Kitasatospora setae KM-6054, NBRC 14216  
Other Names
  
Legacy ER Project ID
10999  
Legacy GOLD ID
Gi01853, Gc01542  
NCBI BioProject Name Kitasatospora setae KM-6054
NCBI BioProject ID 19951
NCBI BioProject Accession
PRJDA19951  
NCBI Locus Tag
KSE  
NCBI BioSample Accession
  
PI Fujita N
Added By Nikos Kyrpides on 2007-11-27 00:00:00.0
Last Modified By Jon Bertsch on 2014-04-08 00:00:00.0
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Antibiotic production
Biotechnological
Sequencing Center National Institute of Technology and Evaluation (Japan)
Collaborating Institute
  
Funding Agency
  
Project Description
produce setamycin (bafilomycin B1) possessing antitrichomonal activity  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications DNA research : an international journal for rapid publication of reports on genes and genomes 17(6):393-406 Genome sequence of Kitasatospora setae NBRC 14216T: an evolutionary snapshot of the family Streptomycetaceae.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Kitasatospora setae KM-6054, NBRC 14216
Analysis Projects Kitasatospora setae KM-6054, NBRC 14216
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
1.6, 6.5 and 37 kb inserts  
Number Of Reads
50400  
Read Size
  
Vector
pUC118 (TaKaRa), pCC1FOS (EPICENTRE)  
GC Percent
74  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0001117
Organism Name
Kitasatospora setae KM-6054, NBRC 14216  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Kitasatospora  
Genus Synonyms
  
Species
Kitasatospora setae  
Subspecies
  
Species Synonyms
  
Strain
KM-6054, NBRC 14216, DSM 43861  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
NBRC 14216  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.7265  
Exemplar Name
Streptomyces setae  
Taxon DOI
10.1601/tx.7265  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 452652
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinobacteria  
NCBI Order
Streptomycetales  
NCBI Family
Streptomycetaceae  
NCBI Genus
Kitasatospora  
NCBI Species
Kitasatospora setae  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
  
Motility
  
Sporulation
Sporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Soil
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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