PROJECT NAME
GOLD Project ID
Gp0001057  
Project Name
Burkholderia cenocepacia gv. III J2315  
Other Names
  
Legacy ER Project ID
10938  
Legacy GOLD ID
Gi00104, Gc00890  
NCBI BioProject Name Burkholderia cenocepacia J2315
NCBI BioProject ID 339
NCBI BioProject Accession
PRJNA339  
NCBI Locus Tag
  
NCBI BioSample Accession
SAMEA1705928  
PI Holden MTG
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Human Pathogen
Medical
Sequencing Center Wellcome Trust Sanger Institute (United Kingdom)
Collaborating Institute
  
Funding Agency Beowulf Genomics (United Kingdom)
Project Description
Causes necrotizing pneumonia, chronic infections  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
Bcepacia AC1100
International working group
Taxonomy
Database
  
Genome Publications Journal of bacteriology 191(1):261-77 The genome of Burkholderia cenocepacia J2315, an epidemic pathogen of cystic fibrosis patients.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Burkholderia cenocepacia J2315
Analysis Projects Burkholderia cenocepacia gv. III J2315
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
1-6kb  
Number Of Reads
215165  
Read Size
  
Vector
m13mp1, pUC18  
GC Percent
67  
Chromosome Count
3  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0001057
Organism Name
Burkholderia cenocepacia gv. III J2315  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-BETA  
Genus
Burkholderia  
Genus Synonyms
  
Species
Burkholderia cenocepacia  
Subspecies
  
Species Synonyms
  
Strain
J2315  
Strain Synonyms
  
Serovar-Biovar
genomovar III  
Culture Collection ID
ATCC BAA-245  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.1627  
Exemplar Name
Burkholderia cenocepacia  
Taxon DOI
10.1601/tx.1627  
Biosafety Level
2  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 216591
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Betaproteobacteria  
NCBI Order
Burkholderiales  
NCBI Family
Burkholderiaceae  
NCBI Genus
Burkholderia  
NCBI Species
Burkholderia cenocepacia  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 322838
Genbank 16S ID AF148556
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Chronic infection
Necrotizing Pneumonia
Known Habitats Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

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