PROJECT NAME
GOLD Project ID
Gp0001035  
Project Name
Bartonella tribocorum CIP 105476  
Other Names
  
Legacy ER Project ID
10917  
Legacy GOLD ID
Gi01157, Gc00700  
NCBI BioProject Name Bartonella tribocorum CIP 105476
NCBI BioProject ID 28109
NCBI BioProject Accession
PRJNA28109  
NCBI Locus Tag
BTR  
NCBI BioSample Accession
SAMEA3138339  
PI Schuster SC
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-08-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Medical
Rat Pathogen
Sequencing Center Max Planck Institute (Germany)
Collaborating Institute
  
Funding Agency
  
Project Description
Intracellular pathogen isolated from wild rats  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Isolation
Taxonomy
Entrez
Database
  
Genome Publications Nature genetics Genomic analysis of Bartonella identifies type IV secretion systems as host adaptability factors.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Bartonella tribocorum CIP 105476
Analysis Projects Bartonella tribocorum CIP 105476
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
3-5kb, 35-43kb, 100-180kb  
Number Of Reads
  
Read Size
  
Vector
TOPO, Epicentre, Bio S&T  
GC Percent
39  
Chromosome Count
1  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0001035
Organism Name
Bartonella tribocorum CIP 105476  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Bartonella  
Genus Synonyms
  
Species
Bartonella tribocorum  
Subspecies
  
Species Synonyms
  
Strain
CIP 105476  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
CIP 105476  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.1375  
Exemplar Name
Bartonella tribocorum  
Taxon DOI
10.1601/tx.1375  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 382640
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhizobiales  
NCBI Family
Bartonellaceae  
NCBI Genus
Bartonella  
NCBI Species
Bartonella tribocorum  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Mammals  
Ecosystem Type
Circulatory system  
Ecosystem Subtype
Blood  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 149216
Genbank 16S ID AJ003070
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Bartonellosis
Known Habitats Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

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