PROJECT INFORMATION | |
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GOLD Project ID
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Gp0000982
|
Project Name
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Bacillus cereus AH820
|
Other Names
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|
Legacy ER Project ID
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10871
|
Legacy GOLD ID
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Gi01257, Gc00917
|
NCBI BioProject Name | Bacillus cereus AH820 |
NCBI BioProject ID
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17711 |
NCBI BioProject Accession
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PRJNA17711 |
NCBI Locus Tag
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BCAH820
|
NCBI BioSample Accession
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SAMN02604057 |
PI | Sorokin A |
Added By |
Nikos Kyrpides
on 2007-11-27 |
Last Modified By |
JGI automated process
on 2014-03-26 |
Project Comments |
|
Project Status
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Complete and Published
|
Project Relevance
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Biothreat Human Pathogen Medical |
Sequencing Center
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J. Craig Venter Institute (JCVI)
(USA)
|
Collaborating Institute
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|
Funding Agency
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National Institute of Allergy and Infectious Diseases
(USA)
|
Project Description
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Isolated from a periodontal pocket of a 76 year old woman
|
Is JGI Project |
No
|
Project Information Visibility
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Public |
PROJECT TYPE | |
Specimen
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Organism |
Nucleic Acid
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DNA |
Sequencing Strategy
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Whole Genome Sequencing
|
EXTERNAL PROJECT LINKS | |
Project Information
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|
Database
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Genome Publications
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Other Publications
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|
SRA Experiment |
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PROJECT COMPOSITION | |
Study |
Bacillus cereus sequencing - TIGR |
Organism |
Bacillus cereus AH820 |
Analysis Projects |
Bacillus cereus AH820 |
Number of Analysis Projects (AP) |
1 |
Number of Derived Analyis Projects (DAP) |
0
|
SEQUENCING INFORMATION | |
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Sequencing Status
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Complete |
Sequencing Quality (MIGS-31) |
Level 6: Finished |
Finishing Goal
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|
Contamination Screening Input
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DNA Amplification Method
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Sequencing Comments
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DNA Amplification Kit
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|
Sequencing Technology
(MIGS-29)
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|
Library Method
(MIGS-28)
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33-39Kb, 10-12Kb, 3-5Kb
|
Library Layout
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Library Screening Method
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Number Of Reads
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72374
|
Read Size
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|
Vector
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|
GC Percent |
35
|
Chromosome Count |
1
|
Plasmid Count |
3
|
ORGANISM NAME | |
---|---|
GOLD Organism ID |
Go0000982 |
Organism Name |
Bacillus cereus AH820
|
Other names (alias, synonyms, short names, common names) |
|
Organism Domain |
BACTERIAL
|
Phylogeny |
FIRMICUTES
|
Genus |
Bacillus
|
Genus Synonyms |
|
Species |
Bacillus cereus
|
Subspecies |
|
Species Synonyms |
|
Strain |
AH820
|
Strain Synonyms |
|
Serovar/Cultivar |
|
Culture Collection ID |
|
Type Strain |
Unknown
|
Exemplar DOI |
|
Exemplar Name |
|
Taxon DOI |
|
Biosafety Level |
|
Organism Comments |
|
Cultured |
Yes
|
Culture Type |
Isolate
|
Organism Type |
Natural
|
Uncultured Type |
|
Commercial Strain |
|
Commercial Strain Comments |
|
ORGANISM TAXONOMY
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|
NCBI Taxonomy ID |
405535 |
NCBI Superkingdom |
Bacteria
|
NCBI Kingdom |
|
NCBI Phylum |
Firmicutes
|
NCBI Class |
Bacilli
|
NCBI Order |
Bacillales
|
NCBI Family |
Bacillaceae
|
NCBI Genus |
Bacillus
|
NCBI Species |
Bacillus cereus
|
ISOLATION CLASSIFICATION | |
Ecosystem |
Host-associated
|
Ecosystem Category |
Human
|
Ecosystem Type |
Digestive system
|
Ecosystem Subtype |
Oral cavity
|
Specific Ecosystem |
Periodontal pockets
|
ORGANISM EXTERNAL REFERENCES | |
Strain Info ID |
|
Genbank 16S ID |
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GENERAL PROPERTIES | |
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Oxygen Requirement |
Facultative
|
Cell Shape |
Rod-shaped
|
Motility |
Motile
|
Sporulation |
Sporulating
|
Temperature Range |
Mesophile
|
Salinity |
|
pH |
|
Cell Diameter |
|
Cell Length |
|
Color |
|
Gram Staining |
Gram+
|
Biotic Relationships | Free living |
Symbiotic Physical Interaction |
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Symbiotic Relationship |
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Symbiont Name |
|
Symbiont Taxon ID |
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Cell Arrangements |
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Diseases |
Food poisoning |
Known Habitats |
Soil Host |
Metabolisms |
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Phenotypes |
Pathogen |
Energy Sources |
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