PROJECT NAME
GOLD Project ID
Gp0000957  
Project Name
Atopobium minutum ATCC 33267  
Other Names
  
Legacy ER Project ID
10849  
Legacy GOLD ID
Gi00044  
NCBI BioProject Name Atopobium minutum ATCC 33267
NCBI BioProject ID 13208
NCBI BioProject Accession
PRJNA13208  
NCBI Locus Tag
  
NCBI BioSample Accession
  
PI IG
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Nikos Kyrpides on 2008-11-03
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
incomplete  
Project Relevance Biotechnological
Sequencing Center Integrated Genomics (USA)
Collaborating Institute
  
Funding Agency Integrated Genomics (USA)
Project Description
Anaerobic organism isolated from perineal abscess  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information ATCC
Entrez
Taxonomy
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Studies Atopobium minutum ATCC 33267
Analysis Projects
  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0000957
Organism Name
Atopobium minutum ATCC 33267  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Atopobium  
Genus Synonyms
  
Species
Atopobium minutum  
Subspecies
  
Species Synonyms
  
Strain
ATCC 33267  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 33267  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.5403  
Exemplar Name
Atopobium minutum  
Taxon DOI
10.1601/tx.5740  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1381
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Coriobacteriia  
NCBI Order
Coriobacteriales  
NCBI Family
Atopobiaceae  
NCBI Genus
Atopobium  
NCBI Species
Atopobium minutum  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Skin  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID M59059
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Gingival crevices
Host
Human abscess
Urogenital tract
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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