PROJECT INFORMATION | |
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GOLD Project ID
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Gp0000923
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Project Name
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Borrelia recurrentis A1
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Other Names
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Legacy ER Project ID
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10814
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Legacy GOLD ID
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Gi01737, Gc00860
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NCBI BioProject Name | Borrelia recurrentis A1 |
NCBI BioProject ID
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18233 |
NCBI BioProject Accession
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PRJNA18233 |
NCBI Locus Tag
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BRE
|
NCBI BioSample Accession
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SAMN02603586 |
PI | Drancourt M |
Added By |
Nikos Kyrpides
on 2007-11-27 |
Last Modified By |
JGI automated process
on 2014-03-26 |
Project Comments |
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Project Status
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Complete and Published
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Project Relevance
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Human Pathogen Medical |
Sequencing Center
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Marseille-Nice Genopole
|
Collaborating Institute
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Funding Agency
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Project Description
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Causes louse-borne relapsing fever
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Project Information Visibility
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Public |
PROJECT TYPE | |
Specimen
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Organism |
Nucleic Acid
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DNA |
Sequencing Strategy
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Whole Genome Sequencing
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EXTERNAL PROJECT LINKS | |
Project Information
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|
Database
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|
Genome Publications
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PLoS genetics
4(9):e1000185
The genome of Borrelia recurrentis, the agent of deadly louse-borne relapsing fever, is a degraded subset of tick-borne Borrelia duttonii.
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Other Publications
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PROJECT COMPOSITION | |
Study |
Borrelia recurrentis A1 |
Organism |
Borrelia recurrentis A1 |
Analysis Projects |
Borrelia recurrentis A1 |
Number of Analysis Projects |
1 |
Number of DAPs |
0
|
SEQUENCING INFORMATION | |
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Sequencing Status
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Complete |
Sequencing Quality (MIGS-31) |
Level 6: Finished |
Finishing Goal
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Level 6: Finished |
Sequencing Comments
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|
Sequencing Technology
(MIGS-29)
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|
Library Method
(MIGS-28)
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2 kb, 5 kb, and 10 kb
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Number Of Reads
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19084
|
Read Size
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|
Vector
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pCDNA2.1
|
GC Percent |
28
|
Chromosome Count |
1
|
Plasmid Count |
7
|
ORGANISM NAME | |
---|---|
GOLD Organism ID |
Go0000923 |
Organism Name |
Borrelia recurrentis A1
|
Other names (alias, synonyms, short names, common names) |
|
Organism Domain |
BACTERIAL
|
Phylogeny |
SPIROCHAETES
|
Genus |
Borrelia
|
Genus Synonyms |
|
Species |
Borrelia recurrentis
|
Subspecies |
|
Species Synonyms |
|
Strain |
A1
|
Strain Synonyms |
|
Serovar-Biovar |
|
Culture Collection ID |
|
Type Strain |
Unknown
|
Exemplar DOI |
|
Exemplar Name |
|
Taxon DOI |
|
Biosafety Level |
|
Organism Comments |
|
Cultured |
Yes
|
Culture Type |
Isolate
|
Organism Type |
Natural
|
Uncultured Type |
|
Commercial Strain |
|
Commercial Strain Comments |
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ORGANISM TAXONOMY
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|
NCBI Taxonomy ID |
412418 |
NCBI Superkingdom |
Bacteria
|
NCBI Kingdom |
|
NCBI Phylum |
Spirochaetes
|
NCBI Class |
Spirochaetia
|
NCBI Order |
Spirochaetales
|
NCBI Family |
Borreliaceae
|
NCBI Genus |
Borrelia
|
NCBI Species |
Borrelia recurrentis
|
ISOLATION CLASSIFICATION | |
Ecosystem |
Host-associated
|
Ecosystem Category |
Human
|
Ecosystem Type |
Unclassified
|
Ecosystem Subtype |
Unclassified
|
Specific Ecosystem |
Unclassified
|
ORGANISM EXTERNAL REFERENCES | |
Strain Info ID |
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Genbank 16S ID |
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GENERAL PROPERTIES | |
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Oxygen Requirement |
Aerobe
|
Cell Shape |
Spiral-shaped
|
Motility |
Motile
|
Sporulation |
Nonsporulating
|
Temperature Range |
Mesophile
|
Temperature Optimum |
|
Salinity |
|
pH |
|
Cell Diameter |
|
Cell Length |
|
Color |
|
Gram Staining |
Gram-
|
Biotic Relationships | Free living |
Symbiotic Physical Interaction |
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Symbiotic Relationship |
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Symbiont Name |
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Symbiont Taxon ID |
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Cell Arrangements |
Singles |
Diseases |
Louse-borne relapsing fever |
Known Habitats |
Host |
Metabolisms |
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Phenotypes |
Pathogen |
Energy Sources |
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