PROJECT NAME
GOLD Project ID
Gp0000799  
Project Name
Acidobacterium capsulatum ATCC 51196  
Other Names
  
Legacy ER Project ID
10691  
Legacy GOLD ID
Gi00004, Gc00956  
NCBI BioProject Name Acidobacterium capsulatum ATCC 51196
NCBI BioProject ID 28085
NCBI BioProject Accession
PRJNA28085  
NCBI Locus Tag
ACP  
NCBI BioSample Accession
SAMN02603447  
PI Cheryl Kuske
Added By Nikos Kyrpides on 2007-11-27 00:00:00.0
Last Modified By Jon Bertsch on 2014-04-08 00:00:00.0
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Bioremediation
Biotechnological
Environmental
Sequencing Center J. Craig Venter Institute (JCVI) (USA)
Los Alamos National Laboratory (USA)
Collaborating Institute
  
Funding Agency National Science Foundation (NSF) (USA)
Project Description
An acidophilic chemoorganotrophic bacterium isolated from an acidic mineral environment  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Image
Taxonomy
Database
  
Genome Publications Applied and environmental microbiology 75(7):2046-56 Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Acidobacterium capsulatum ATCC 51196
Analysis Projects Acidobacterium capsulatum ATCC 51196
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
1.8-2.8Kb, 6.5-11Kb  
Number Of Reads
49530  
Read Size
  
Vector
  
GC Percent
60  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000799
Organism Name
Acidobacterium capsulatum ATCC 51196  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACIDOBACTERIA  
Genus
Acidobacterium  
Genus Synonyms
  
Species
Acidobacterium capsulatum  
Subspecies
  
Species Synonyms
  
Strain
ATCC 51196  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 51196  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.7922  
Exemplar Name
Acidobacterium capsulatum  
Taxon DOI
10.1601/tx.7922  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 240015
NCBI Kingdom
  
NCBI Phylum
Acidobacteria  
NCBI Class
Acidobacteriia  
NCBI Order
Acidobacteriales  
NCBI Family
Acidobacteriaceae  
NCBI Genus
Acidobacterium  
NCBI Species
Acidobacterium capsulatum  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Geologic  
Ecosystem Subtype
Mine  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 115308
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
30  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases None
Known Habitats Acid mine drainage
Fresh water
Soil
Metabolisms
  
Phenotypes Acidophile
Energy Sources Chemoorganotroph
Heterotroph

 

 

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