PROJECT NAME
GOLD Project ID
Gp0000775  
Project Name
Pyrococcus horikoshii OT3  
Other Names
  
Legacy ER Project ID
10672  
Legacy GOLD ID
Gc00014  
NCBI BioProject Name Pyrococcus horikoshii OT3
NCBI BioProject ID 207
NCBI BioProject Accession
PRJNA207  
NCBI Locus Tag
P  
NCBI BioSample Accession
  
PI Kawarabayasi Y
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Sequencing Center National Institute of Technology and Evaluation (Japan)
Collaborating Institute University of Tokyo (Switzerland)
Funding Agency National Institute of Technology and Evaluation (Japan)
Project Description
Anaerobic hyperthermophilic archeon  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
ArchaeaWeb
Taxonomy
Database
  
Genome Publications DNA research : an international journal for rapid publication of reports on genes and genomes Complete sequence and gene organization of the genome of a hyper-thermophilic archaebacterium, Pyrococcus horikoshii OT3.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Pyrococcus horikoshii OT3
Analysis Projects Pyrococcus horikoshii OT3
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
0.8-1.2 kb and 2.0-2.5 kb, fosmid and BAC libraries  
Number Of Reads
  
Read Size
  
Vector
pUC118, pBAC108L  
GC Percent
42  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000775
Organism Name
Pyrococcus horikoshii OT3  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-THERMOCOCCI  
Genus
Pyrococcus  
Genus Synonyms
  
Species
Pyrococcus horikoshii  
Subspecies
  
Species Synonyms
  
Strain
OT3  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 700860  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.401  
Exemplar Name
Pyrococcus horikoshii  
Taxon DOI
10.1601/tx.401  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 70601
NCBI Kingdom
  
NCBI Phylum
Euryarchaeota  
NCBI Class
Thermococci  
NCBI Order
Thermococcales  
NCBI Family
Thermococcaceae  
NCBI Genus
Pyrococcus  
NCBI Species
Pyrococcus horikoshii  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Hydrothermal vents  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 163167
Genbank 16S ID D87344
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Obligate anaerobe  
Cell Shape
Coccus-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Hyperthermophile  
Temperature Optimum
80 - 102  
Salinity
  
pH
7  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Aquatic
Hot spring
Hydrothermal vent
Marine
Metabolisms Sulfur respiration
Phenotypes
  
Energy Sources
  

 

 

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