PROJECT INFORMATION
GOLD Project ID
Gp0000753  
Project Name
Buchnera aphidicola APS  
Other Names
  
Legacy ER Project ID
10651  
Legacy GOLD ID
Gc00035  
NCBI BioProject Name Buchnera aphidicola str. APS (Acyrthosiphon pisum)
NCBI BioProject ID 245
NCBI BioProject Accession PRJNA245
NCBI Locus Tag
BU  
NCBI BioSample Accession
PI Ishikawa H
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Michelle Isbandi on 2016-01-26
Project Comments
  
Project Status
Complete and Published  
Project Relevance Evolution
Biotechnological
Sequencing Center RIKEN (Japan)
Collaborating Institute University of Tokyo (Japan)
Funding Agency Pro BRAIN (Japan)
Ministry of Education, Culture, Sports and Technology (MEXT), Japan (Japan)
Project Description
Primary endosymbiont of the Acyrthosiphon pisum aphid  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information Wikipedia
Database
  
Genome Publications Nature Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS.
Other Publications
  
PROJECT COMPOSITION
Study Buchnera aphidicola APS
Analysis Projects Buchnera aphidicola APS
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
shotgun sequence libraries, 1.6 and 2.0 kb inserts  
Number Of Reads
9747  
Read Size
642011  
Vector
pGEM-T Easy, pUC18  
GC Percent
26  
Chromosome Count
1  
Plasmid Count
2  
ORGANISM NAME
GOLD Organism ID Go0000753
Organism Name
Buchnera aphidicola APS  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Buchnera  
Genus Synonyms
  
Species
Buchnera aphidicola  
Subspecies
  
Species Synonyms
  
Strain
APS  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
No  
Culture Type
  
Organism Type
Natural  
Uncultured Type
Eukaryotic symbiont  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 107806
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Enterobacterales  
NCBI Family
Erwiniaceae  
NCBI Genus
Buchnera  
NCBI Species
Buchnera aphidicola  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Insecta  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Symbiotic
Symbiotic Physical Interaction
Endosymbiotic intracellular  
Symbiotic Relationship
Mutualistic  
Symbiont Name
Acyrthosiphon pisum  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Host
Insect endosymbiont
Endosymbiont
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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