PROJECT NAME
GOLD Project ID
Gp0000752  
Project Name
Thermoplasma acidophilum DSM 1728  
Other Names
  
Legacy ER Project ID
10650  
Legacy GOLD ID
Gc00036  
NCBI BioProject Name Thermoplasma acidophilum DSM 1728
NCBI BioProject ID 110
NCBI BioProject Accession
PRJNA110  
NCBI Locus Tag
Ta  
NCBI BioSample Accession
SAMEA3138325  
PI Baumeister W
Added By Nikos Kyrpides on 2007-11-27 00:00:00.0
Last Modified By Auto script update processes on 2014-03-26 00:00:00.0
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Evolution
Sequencing Center Max Planck Institute (Germany)
Eurofins Medigenomix GmbH (Germany)
Collaborating Institute
  
Funding Agency
  
Project Description
Thermophilic acidophilic archaea  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
ArchaeaWeb
Wikipedia
Taxonomy
Database
  
Genome Publications Nature The genome sequence of the thermoacidophilic scavenger Thermoplasma acidophilum.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Thermoplasma acidophilum DSM 1728
Analysis Projects Thermoplasma acidophilum DSM 1728
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
3 kbp to 8 kbp,phagemid library and cosmid library (4.5 - 15.9 kbp)  
Number Of Reads
  
Read Size
  
Vector
Lambda ZAP express vector, SuperCos I   
GC Percent
46  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0000752
Organism Name
Thermoplasma acidophilum DSM 1728  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-THERMOPLASMATA  
Genus
Thermoplasma  
Genus Synonyms
  
Species
Thermoplasma acidophilum  
Subspecies
  
Species Synonyms
  
Strain
DSM 1728  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 1728  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.362  
Exemplar Name
Thermoplasma acidophilum  
Taxon DOI
10.1601/tx.362  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 273075
NCBI Kingdom
  
NCBI Phylum
Euryarchaeota  
NCBI Class
Thermoplasmata  
NCBI Order
Thermoplasmatales  
NCBI Family
Thermoplasmataceae  
NCBI Genus
Thermoplasma  
NCBI Species
Thermoplasma acidophilum  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Geologic  
Ecosystem Subtype
Mine  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 104667
Genbank 16S ID M38637:{979-2449}
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Thermophile  
Temperature Optimum
45 - 63  
Salinity
  
pH
0.5 - 4  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Solfataric field
Metabolisms
  
Phenotypes Acidophile
Energy Sources
  

 

 

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