PROJECT INFORMATION
GOLD Project ID
Gp0000748  
Project Name
Mesorhizobium loti MAFF303099  
Other Names
  
Legacy ER Project ID
10646  
Legacy GOLD ID
Gc00040  
NCBI BioProject Name Mesorhizobium loti MAFF303099
NCBI BioProject ID 18
NCBI BioProject Accession PRJNA18
NCBI Locus Tag
MAFF  
NCBI BioSample Accession
PI Tabata S
Added By Nikos Kyrpides on 2007-11-27
Last Modified By JGI automated process on 2014-05-20
Project Comments
  
Project Status
Complete and Published  
Project Relevance Root Nodulating Bacteria (RNB)
Environmental
Bioremediation
Sequencing Center Kazusa DNA Research Institute (Japan)
Collaborating Institute
  
Funding Agency
  
Project Description
Symbiotic nitrogen-fixing bacteria  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information Entrez
Database
  
Genome Publications DNA research : an international journal for rapid publication of reports on genes and genomes Complete genome structure of the nitrogen-fixing symbiotic bacterium Mesorhizobium loti.
Other Publications
  
PROJECT COMPOSITION
Study Mesorhizobium loti MAFF303099
Analysis Projects Mesorhizobium loti MAFF303099
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
1kb, 2.6kb, 8.5kb and 25kb inserts  
Number Of Reads
90706  
Read Size
  
Vector
M13mpl8, puC18, pKS800  
GC Percent
63  
Chromosome Count
1  
Plasmid Count
2  
ORGANISM NAME
GOLD Organism ID Go0088098
Organism Name
Mesorhizobium loti MAFF303099  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Mesorhizobium  
Genus Synonyms
  
Species
Mesorhizobium loti  
Subspecies
  
Species Synonyms
  
Strain
MAFF303099  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
JCM 21590  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 266835
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhizobiales  
NCBI Family
Phyllobacteriaceae  
NCBI Genus
Mesorhizobium  
NCBI Species
Mesorhizobium japonicum  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Birds  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 373790
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Symbiotic
Symbiotic Physical Interaction
  
Symbiotic Relationship
Mutualistic  
Symbiont Name
Lotus corniculatus  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Host
Metabolisms Nitrogen fixation
Phenotypes
  
Energy Sources
  
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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