PROJECT INFORMATION
GOLD Project ID
Gp0000719  
Project Name
Streptococcus pneumoniae R6  
Other Names
  
Legacy ER Project ID
10621  
Legacy GOLD ID
Gc00065  
NCBI BioProject Name Streptococcus pneumoniae R6
NCBI BioProject ID 278
NCBI BioProject Accession PRJNA278
NCBI Locus Tag
spr  
NCBI BioSample Accession SAMN02603218
PI Glass JI
Added By Nikos Kyrpides on 2007-11-27
Last Modified By JGI automated process on 2014-08-18
Project Comments
  
Project Status
Complete and Published  
Project Relevance Human Pathogen
Medical
Sequencing Center Eli Lilly and Company (USA)
Collaborating Institute
  
Funding Agency Eli Lilly and Company (USA)
Project Description
Avirulent isolate  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information Wikipedia
Taxonomy
Entrez
Database
  
Genome Publications Journal of bacteriology Genome of the bacterium Streptococcus pneumoniae strain R6.
Other Publications
  
PROJECT COMPOSITION
Study Streptococcus pneumoniae R6
Analysis Projects Streptococcus pneumoniae R6
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
plasmid and fosmid libraries  
Number Of Reads
44000  
Read Size
  
Vector
  
GC Percent
40  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000719
Organism Name
Streptococcus pneumoniae R6  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Streptococcus  
Genus Synonyms
  
Species
Streptococcus pneumoniae  
Subspecies
  
Species Synonyms
  
Strain
R6  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC BAA-255  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
2  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 171101
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Streptococcaceae  
NCBI Genus
Streptococcus  
NCBI Species
Streptococcus pneumoniae  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Unclassified  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 269575
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Coccus-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
30 - 35  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Pairs
Chains
Diseases Pneumonia
Known Habitats Host
Nasopharyngeal microflora
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

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