PROJECT NAME
GOLD Project ID
Gp0000714  
Project Name
Listeria innocua sv. 6a Clip11262  
Other Names
  
Legacy ER Project ID
10618  
Legacy GOLD ID
Gc00068  
NCBI BioProject Name Listeria innocua Clip11262
NCBI BioProject ID 86
NCBI BioProject Accession
PRJNA86  
NCBI Locus Tag
LIN  
NCBI BioSample Accession
SAMEA3138320  
PI Cossart P
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Medical
Sequencing Center
  
Collaborating Institute ANRT (France)
Funding Agency Institut Pasteur (France)
European Union (EU) (European Union)
Project Description
Nonpathogenic as compared to Listeria monocytogenes  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
Wikipedia
Taxonomy
Database
  
Genome Publications "Science (New York, N.Y.)" Comparative genomics of Listeria species.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Listeria innocua Clip11262
Analysis Projects Listeria innocua sv. 6a Clip11262
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
1-2 kb and 2-3 kb  
Number Of Reads
31847  
Read Size
  
Vector
pcDNA-2.1  
GC Percent
37  
Chromosome Count
1  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0000714
Organism Name
Listeria innocua sv. 6a Clip11262  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Listeria  
Genus Synonyms
  
Species
Listeria innocua  
Subspecies
  
Species Synonyms
  
Strain
Clip11262  
Strain Synonyms
  
Serovar-Biovar
6a  
Culture Collection ID
ATCC BAA-680  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 272626
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Bacillales  
NCBI Family
Listeriaceae  
NCBI Genus
Listeria  
NCBI Species
Listeria innocua  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Food production  
Ecosystem Type
Dairy products  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 494327
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
30 - 37  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Chains
Singles
Diseases None
Known Habitats Soil
Metabolisms
  
Phenotypes Non-Pathogen
Energy Sources Chemoorganotroph

 

 

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