PROJECT NAME
GOLD Project ID
Gp0000700  
Project Name
Methanopyrus kandleri AV19  
Other Names
  
Legacy ER Project ID
10606  
Legacy GOLD ID
Gc00080  
NCBI BioProject Name Methanopyrus kandleri AV19
NCBI BioProject ID 294
NCBI BioProject Accession
PRJNA294  
NCBI Locus Tag
MK  
NCBI BioSample Accession
SAMN02603235  
PI Slesarev AI
Added By Nikos Kyrpides on 2007-11-27 00:00:00.0
Last Modified By Jon Bertsch on 2014-04-08 00:00:00.0
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Carbon cycle
Energy production
Environmental
Sequencing Center Fidelity Systems Inc (USA)
Collaborating Institute
  
Funding Agency NIH (USA)
Project Description
Thermophilic methanogenic archaeon  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
ArchaeaWeb
Wikipedia
Taxonomy
Database
  
Genome Publications Proceedings of the National Academy of Sciences of the United States of America The complete genome of hyperthermophile Methanopyrus kandleri AV19 and monophyly of archaeal methanogens.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Methanopyrus kandleri AV19
Analysis Projects Methanopyrus kandleri AV19
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
2¿4 kb inserts, 3 lambda libraries  
Number Of Reads
14139  
Read Size
  
Vector
pUC18  
GC Percent
61  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000700
Organism Name
Methanopyrus kandleri AV19  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-METHANOPYRI  
Genus
Methanopyrus  
Genus Synonyms
  
Species
Methanopyrus kandleri  
Subspecies
  
Species Synonyms
  
Strain
AV19  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 6324  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.418  
Exemplar Name
Methanopyrus kandleri  
Taxon DOI
10.1601/tx.418  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 190192
NCBI Kingdom
  
NCBI Phylum
Euryarchaeota  
NCBI Class
Methanopyri  
NCBI Order
Methanopyrales  
NCBI Family
Methanopyraceae  
NCBI Genus
Methanopyrus  
NCBI Species
Methanopyrus kandleri  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Hydrothermal vents  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 159947
Genbank 16S ID M59932
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
  
Sporulation
Nonsporulating  
Temperature Range
Hyperthermophile  
Temperature Optimum
80 - 101  
Salinity
  
pH
5.5 - 7  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Marine
Metabolisms Methanogen
Phenotypes
  
Energy Sources Lithotroph

 

 

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