PROJECT NAME
GOLD Project ID
Gp0000694  
Project Name
Fusobacterium nucleatum nucleatum ATCC 25586  
Other Names
  
Legacy ER Project ID
10601  
Legacy GOLD ID
Gc00085  
NCBI BioProject Name Fusobacterium nucleatum subsp. nucleatum ATCC 25586
NCBI BioProject ID 295
NCBI BioProject Accession
PRJNA295  
NCBI Locus Tag
FN  
NCBI BioSample Accession
SAMN02603417  
PI Kapatral V
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-08-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Human Pathogen
Medical
Sequencing Center Integrated Genomics (USA)
Collaborating Institute
  
Funding Agency NIH (USA)
Project Description
Oral bacterium contributing to tooth decay.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
Wikipedia
Taxonomy
Database
  
Genome Publications Journal of bacteriology Genome sequence and analysis of the oral bacterium Fusobacterium nucleatum strain ATCC 25586.
Other Publications
  
PROJECT COMPOSITION
Studies Gc00085
Analysis Projects Fusobacterium nucleatum nucleatum ATCC 25586
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
2-3kb, 10-12kb, 30-35kb inserts  
Number Of Reads
18000  
Read Size
  
Vector
pGEM3, Lorist 6, lambda DASH  
GC Percent
27  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000694
Organism Name
Fusobacterium nucleatum nucleatum ATCC 25586  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FUSOBACTERIA  
Genus
Fusobacterium  
Genus Synonyms
  
Species
Fusobacterium nucleatum  
Subspecies
nucleatum  
Species Synonyms
  
Strain
ATCC 25586  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 25586  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.8348  
Exemplar Name
Fusobacterium nucleatum  
Taxon DOI
10.1601/tx.10734  
Biosafety Level
2  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 190304
NCBI Kingdom
  
NCBI Phylum
Fusobacteria  
NCBI Class
Fusobacteriia  
NCBI Order
Fusobacteriales  
NCBI Family
Fusobacteriaceae  
NCBI Genus
Fusobacterium  
NCBI Species
Fusobacterium nucleatum  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Animal  
Ecosystem Type
Reproductive system  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 31256
Genbank 16S ID X55401
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Filament-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
37  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Periodontal infection
Known Habitats Host
Oral cavity
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

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