PROJECT NAME
GOLD Project ID
Gp0000690  
Project Name
Pontibacter actiniarum KMM 6156, DSM 19842  
Other Names
  
Legacy ER Project ID
15150  
Legacy GOLD ID
Gi04619  
NCBI BioProject Name Pontibacter actiniarum DSM 19842
NCBI BioProject ID 43369
NCBI BioProject Accession
PRJNA43369  
NCBI Locus Tag
Ponac  
NCBI BioSample Accession
SAMN02441121  
PI Jonathan Eisen
Added By Nikos Kyrpides on 2009-08-03
Last Modified By Auto script update processes on 2014-08-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance GEBA
Tree of Life
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Leibniz Institute (Germany)
Funding Agency Leibniz Institute (Germany)
U.S. Department of Energy (DOE) (USA)
Project Description
Pontibacter actiniarum DSM 19842 genome sequencing project  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information GEBA
Isolation
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies A Genomic Encyclopedia of Bacteria and Archaea (GEBA)
Analysis Projects Pontibacter actiniarum KMM 6156, DSM 19842
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX-Titanium
Illumina
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
53  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0000690
Organism Name
Pontibacter actiniarum KMM 6156, DSM 19842  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Pontibacter  
Genus Synonyms
  
Species
Pontibacter actiniarum  
Subspecies
  
Species Synonyms
  
Strain
KMM 6156, DSM 19842  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 19842  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.9760  
Exemplar Name
Pontibacter actiniarum  
Taxon DOI
10.1601/tx.9760  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 709015
NCBI Kingdom
  
NCBI Phylum
Bacteroidetes  
NCBI Class
Cytophagia  
NCBI Order
Cytophagales  
NCBI Family
Hymenobacteraceae  
NCBI Genus
Pontibacter  
NCBI Species
Pontibacter actiniarum  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Unclassified  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AY989908
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
Pink  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Aquatic
Host
Marine
Metabolisms
  
Phenotypes
  
Energy Sources Heterotroph

 

 

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