PROJECT INFORMATION
GOLD Project ID
Gp0000666  
Project Name
Mycoplasma penetrans HF-2  
Other Names
  
Legacy ER Project ID
10576  
Legacy GOLD ID
Gc00110  
NCBI BioProject Name Mycoplasma penetrans HF-2
NCBI BioProject ID 176
NCBI BioProject Accession PRJNA176
NCBI Locus Tag
MYPE  
NCBI BioSample Accession
PI Sasaki Y
Added By Nikos Kyrpides on 2007-11-27
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
Project Status
Complete and Published  
Project Relevance Human Pathogen
Medical
Sequencing Center RIKEN (Japan)
Collaborating Institute Kitasato University (Japan)
National Institute of Infectious Diseases, Japan (Japan)
Funding Agency
  
Project Description
Causative agent of a wide range of infections of the urogenital and respiratory tracts.  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information Entrez
Taxonomy
Database
  
Genome Publications Nucleic acids research The complete genomic sequence of Mycoplasma penetrans, an intracellular bacterial pathogen in humans.
Other Publications
  
PROJECT COMPOSITION
Study Mycoplasma parvum str. Indiana Genome sequencing
Analysis Projects Mycoplasma penetrans HF-2
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
short (1¿2 kb) and long (4¿5 kb) insert libraries  
Number Of Reads
44761  
Read Size
  
Vector
pUC18  
GC Percent
26  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000666
Organism Name
Mycoplasma penetrans HF-2  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
TENERICUTES  
Genus
Mycoplasma  
Genus Synonyms
  
Species
Mycoplasma penetrans  
Subspecies
  
Species Synonyms
  
Strain
HF-2  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 272633
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Tenericutes  
NCBI Class
Mollicutes  
NCBI Order
Mycoplasmatales  
NCBI Family
Mycoplasmataceae  
NCBI Genus
Mycoplasma  
NCBI Species
Mycoplasma penetrans  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Unclassified  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Sphere-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
37  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases Urogenital infection
Respiratory infection
Known Habitats Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

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