PROJECT NAME
GOLD Project ID
Gp0000654  
Project Name
Lactobacillus plantarum WCFS1  
Other Names
  
Legacy ER Project ID
10564  
Legacy GOLD ID
Gc00122  
NCBI BioProject Name Lactobacillus plantarum WCFS1
NCBI BioProject ID 356
NCBI BioProject Accession
PRJNA356  
NCBI Locus Tag
LP  
NCBI BioSample Accession
SAMEA3138345  
PI Kleerebezem M
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-08-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Food industry
Lactic acid production
Sequencing Center
  
Collaborating Institute NIZO Food Research
Greenomics
Funding Agency
  
Project Description
Single colony isolate from a human isolate  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
Wikipedia
Taxonomy
Database Entrez
Genome Publications Proceedings of the National Academy of Sciences of the United States of America Complete genome sequence of Lactobacillus plantarum WCFS1.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Lactobacillus plantarum WCFS1
Analysis Projects Lactobacillus plantarum WCFS1
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
1 and 2 kb  
Number Of Reads
36000  
Read Size
  
Vector
M13, Lambda ZAP II  
GC Percent
44  
Chromosome Count
1  
Plasmid Count
3  
ORGANISM NAME
GOLD Organism ID Go0000654
Organism Name
Lactobacillus plantarum WCFS1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Lactobacillus  
Genus Synonyms
  
Species
Lactobacillus plantarum  
Subspecies
  
Species Synonyms
  
Strain
WCFS1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 220668
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Lactobacillaceae  
NCBI Genus
Lactobacillus  
NCBI Species
Lactobacillus plantarum  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Oral  
Specific Ecosystem
Saliva  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
25 - 35  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Chains
Diseases None
Known Habitats Host
Intestinal tract
Metabolisms
  
Phenotypes Probiotic
Energy Sources
  

 

 

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