Studies
|
41,354 |
|
Biosamples
|
99,324 |
|
Sequencing Projects
|
338,233 |
|
Analysis Projects
|
275,353 |
| Organisms | 373,402 |
| PROJECT INFORMATION | |
|---|---|
|
GOLD Project ID
|
Gp0000641
|
|
Project Name
|
Bacillus cereus ATCC 14579
|
|
Other Names
|
|
|
Legacy ER Project ID
|
10551
|
|
Legacy GOLD ID
|
Gc00135
|
| NCBI BioProject Name | Bacillus cereus ATCC 14579 |
|
NCBI BioProject ID
|
384 |
|
NCBI BioProject Accession
|
PRJNA384 |
|
NCBI Locus Tag
|
BC
|
|
NCBI BioSample Accession
|
SAMN02603340 |
| PI | Natalia Ivanova |
| Added By |
Nikos Kyrpides
on 2007-11-27 |
| Last Modified By |
JGI automated process
on 2014-08-18 |
| Project Comments |
|
|
Project Status
|
Complete and Published
|
|
Project Relevance
|
Biothreat Human Pathogen Medical |
|
Sequencing Center
|
Integrated Genomics
(USA)
|
|
Collaborating Institute
|
National Institute for Agricultural Research (INRA)
(France)
|
|
Funding Agency
|
Defense Advanced Research Projects Agency (DARPA)
(USA)
|
|
Project Description
|
Soil organism that causes opportunistic infections such as food poisoning
|
| Is JGI Project |
No
|
|
Project Information Visibility
|
Public |
| PROJECT TYPE | |
|
Specimen
|
Organism |
|
Nucleic Acid
|
DNA |
|
Sequencing Strategy
|
Whole Genome Sequencing
|
| EXTERNAL PROJECT LINKS | |
|
Project Information
|
|
|
Database
|
|
|
Genome Publications
|
Nature
Genome sequence of Bacillus cereus and comparative analysis with Bacillus anthracis.
|
|
Other Publications
|
|
| SRA Experiment |
|
| PROJECT COMPOSITION | |
| Study |
Bacillus cereus ATCC 14579 |
| Organism |
Bacillus cereus ATCC 14579 |
| Analysis Projects |
Bacillus cereus ATCC 14579 |
| Number of Analysis Projects |
1 |
| Number of DAPs |
0
|
| SEQUENCING INFORMATION | |
|---|---|
|
Sequencing Status
|
Complete |
| Sequencing Quality (MIGS-31) |
Level 6: Finished |
|
Finishing Goal
|
|
|
Sequencing Comments
|
|
|
Sequencing Technology
(MIGS-29)
|
Sanger |
|
Library Method
(MIGS-28)
|
plasmid (2-3kb inserts) and cosmid (30-35kb inserts) libraries
|
|
Number Of Reads
|
47315
|
|
Read Size
|
|
|
Vector
|
pGEM3, Lorist 6
|
| GC Percent |
35
|
| Chromosome Count |
1
|
| Plasmid Count |
1
|
| ORGANISM NAME | |
|---|---|
| GOLD Organism ID |
Go0025805 |
| Organism Name |
Bacillus cereus ATCC 14579
|
| Other names (alias, synonyms, short names, common names) |
|
| Organism Domain |
BACTERIAL
|
| Phylogeny |
FIRMICUTES
|
| Genus |
Bacillus
|
| Genus Synonyms |
|
| Species |
Bacillus cereus
|
| Subspecies |
|
| Species Synonyms |
|
| Strain |
ATCC 14579
|
| Strain Synonyms |
|
| Serovar/Cultivar |
|
| Culture Collection ID |
ATCC 14579
|
| Type Strain |
Yes
|
| Exemplar DOI |
10.1601/ex.4885
|
| Exemplar Name |
Bacillus cereus
|
| Taxon DOI |
10.1601/tx.4885
|
| Biosafety Level |
1
|
| Organism Comments |
|
| Cultured |
Yes
|
| Culture Type |
Isolate
|
| Organism Type |
Natural
|
| Uncultured Type |
|
| Commercial Strain |
|
| Commercial Strain Comments |
|
|
ORGANISM TAXONOMY
|
|
| NCBI Taxonomy ID |
226900 |
| NCBI Superkingdom |
Bacteria
|
| NCBI Kingdom |
|
| NCBI Phylum |
Firmicutes
|
| NCBI Class |
Bacilli
|
| NCBI Order |
Bacillales
|
| NCBI Family |
Bacillaceae
|
| NCBI Genus |
Bacillus
|
| NCBI Species |
Bacillus cereus
|
| ISOLATION CLASSIFICATION | |
| Ecosystem |
Host-associated
|
| Ecosystem Category |
Unclassified
|
| Ecosystem Type |
Unclassified
|
| Ecosystem Subtype |
Unclassified
|
| Specific Ecosystem |
Unclassified
|
| ORGANISM EXTERNAL REFERENCES | |
| Strain Info ID |
4491 |
| Genbank 16S ID |
DQ207729 |
| GENERAL PROPERTIES | |
|---|---|
| Oxygen Requirement |
Facultative
|
| Cell Shape |
Rod-shaped
|
| Motility |
Motile
|
| Sporulation |
Sporulating
|
| Temperature Range |
Mesophile
|
| Salinity |
|
| pH |
|
| Cell Diameter |
|
| Cell Length |
|
| Color |
|
| Gram Staining |
Gram+
|
| Biotic Relationships | Free living |
| Symbiotic Physical Interaction |
|
| Symbiotic Relationship |
|
| Symbiont Name |
|
| Symbiont Taxon ID |
|
| Cell Arrangements |
|
| Diseases |
Food poisoning |
| Known Habitats |
Soil |
| Metabolisms |
|
| Phenotypes |
Pathogen |
| Energy Sources |
Heterotroph |
You are going to add the following user to your project, biosample and study.
Contact Name/Email: Do you want to continue?
You are going to remove permissions for the following user to your project, biosample and study.
Contact Name/Email: Do you want to continue?
Changing the SP visibility will also change visibility on the following items:
Do you want to continue with this visibility change?
Checking that this Sequencing Project can be made private:
Do you want to continue with this visibility change?
Changing the SP Sequencing Strategy will also effect these items:
Do you want to continue with this Sequencing Strategy change?
