PROJECT INFORMATION
GOLD Project ID
Gp0000636  
Project Name
Corynebacterium efficiens YS-314, DSM 44549  
Other Names
  
Legacy ER Project ID
10546  
Legacy GOLD ID
Gc00140  
NCBI BioProject Name Corynebacterium efficiens YS-314
NCBI BioProject ID 305
NCBI BioProject Accession PRJNA305
NCBI Locus Tag
CE  
NCBI BioSample Accession
PI Gojobori T
Added By Nikos Kyrpides on 2007-11-27
Last Modified By JGI automated process on 2014-05-20
Project Comments
  
Project Status
Complete and Published  
Project Relevance Amino acids production
Biotechnological
Sequencing Center National Institute of Technology and Evaluation (Japan)
Ajinomoto Co., Inc
Collaborating Institute
  
Funding Agency National Institute of Technology and Evaluation (Japan)
Project Description
Industrial amino acid producer.  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information Entrez
Taxonomy
Database
  
Genome Publications Genome research Comparative complete genome sequence analysis of the amino acid replacements responsible for the thermostability of Corynebacterium efficiens.
Other Publications
  
PROJECT COMPOSITION
Study Corynebacterium efficiens YS-314
Analysis Projects Corynebacterium efficiens YS-314, DSM 44549
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
two shotgun libraries, with short fragments (0.8?1.2 kb) and longer fragments (2.0?2.5 kb)  
Number Of Reads
  
Read Size
  
Vector
pUC118  
GC Percent
63  
Chromosome Count
1  
Plasmid Count
2  
ORGANISM NAME
GOLD Organism ID Go0000636
Organism Name
Corynebacterium efficiens YS-314, DSM 44549  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Corynebacterium  
Genus Synonyms
  
Species
Corynebacterium efficiens  
Subspecies
  
Species Synonyms
  
Strain
YS-314T  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 44549  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.6213  
Exemplar Name
Corynebacterium efficiens  
Taxon DOI
10.1601/tx.6213  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 196164
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinobacteria  
NCBI Order
Corynebacteriales  
NCBI Family
Corynebacteriaceae  
NCBI Genus
Corynebacterium  
NCBI Species
Corynebacterium efficiens  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 291608
Genbank 16S ID AB055963
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
30 - 45  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases None
Known Habitats Soil
Metabolisms
  
Phenotypes
  
Energy Sources Chemoorganotroph
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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