PROJECT NAME
GOLD Project ID
Gp0000633  
Project Name
Haemophilus ducreyi 35000HP  
Other Names
  
Legacy ER Project ID
10544  
Legacy GOLD ID
Gc00142  
NCBI BioProject Name Haemophilus ducreyi 35000HP
NCBI BioProject ID 38
NCBI BioProject Accession
PRJNA38  
NCBI Locus Tag
HD  
NCBI BioSample Accession
SAMN02604087  
PI
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Human Pathogen
Medical
Sequencing Center Ohio State University (USA)
Collaborating Institute Institute for Systems Biology (USA)
Funding Agency National Institute of Allergy and Infectious Diseases (USA)
Project Description
Obligate pathogen that causes sexually-transmitted chancroid and enhances HIV transmission  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
Wikipedia
Taxonomy
Database Entrez
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Studies Haemophilus ducreyi 35000HP
Analysis Projects Haemophilus ducreyi 35000HP
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
38  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000633
Organism Name
Haemophilus ducreyi 35000HP  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Haemophilus  
Genus Synonyms
  
Species
Haemophilus ducreyi  
Subspecies
  
Species Synonyms
  
Strain
35000HP  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 700724  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
2  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 233412
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Pasteurellales  
NCBI Family
Pasteurellaceae  
NCBI Genus
Haemophilus  
NCBI Species
[Haemophilus] ducreyi  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Skin  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 328755
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Chancroid
Genital ulcer
Known Habitats Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

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