PROJECT INFORMATION
GOLD Project ID
Gp0000623  
Project Name
Prochlorococcus marinus marinus CCMP1375  
Other Names
Prochlorococcus sp. SS120  
Legacy ER Project ID
10537  
Legacy GOLD ID
Gc00149  
NCBI BioProject Name Prochlorococcus marinus subsp. marinus str. CCMP1375
NCBI BioProject ID 419
NCBI BioProject Accession PRJNA419
NCBI Locus Tag
Pro  
NCBI BioSample Accession SAMN02603142
PI Partensky F
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jyothi Mallajosyula on 2015-02-26
Project Comments
  
Project Status
Complete and Published  
Project Relevance Ocean carbon cycle
Environmental
Biotechnological
Sequencing Center CEA Genoscope (France)
Collaborating Institute
  
Funding Agency European Union (EU) (European Union)
Project Description
Smallest and most abundant bacterium that has unique photosynthesizing components  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information Entrez
Taxonomy
Wikipedia
Database
  
Genome Publications Proceedings of the National Academy of Sciences of the United States of America Genome sequence of the cyanobacterium Prochlorococcus marinus SS120, a nearly minimal oxyphototrophic genome.
Other Publications
  
PROJECT COMPOSITION
Study Prochlorococcus marinus marinus CCMP1375
Analysis Projects Prochlorococcus marinus marinus CCMP1375
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
five pilot libraries (3-10 kb inserts) and two shotgun genomic libraries (7 and 10kb inserts)  
Number Of Reads
38765  
Read Size
  
Vector
pCNS  
GC Percent
36  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000623
Organism Name
Prochlorococcus marinus marinus CCMP 1375  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
CYANOBACTERIA  
Genus
Prochlorococcus  
Genus Synonyms
  
Species
Prochlorococcus marinus  
Subspecies
marinus  
Species Synonyms
  
Strain
CCMP 1375  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
CCMP 1375  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.651  
Exemplar Name
Prochlorococcus marinus marinus CCMP 1375  
Taxon DOI
10.1601/tx.651  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 167539
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Cyanobacteria  
NCBI Class
  
NCBI Order
Synechococcales  
NCBI Family
Prochloraceae  
NCBI Genus
Prochlorococcus  
NCBI Species
Prochlorococcus marinus  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Pelagic  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 278949
Genbank 16S ID AF397701:{1-263}
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
Oval-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Marine
Aquatic
Metabolisms
  
Phenotypes Very low light adapted
Energy Sources Photosynthetic

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?