PROJECT NAME
GOLD Project ID
Gp0000613  
Project Name
Chromobacterium violaceum ATCC 12472  
Other Names
  
Legacy ER Project ID
10529  
Legacy GOLD ID
Gc00157  
NCBI BioProject Name Chromobacterium violaceum ATCC 12472
NCBI BioProject ID 444
NCBI BioProject Accession
PRJNA444  
NCBI Locus Tag
CV  
NCBI BioSample Accession
SAMN02603528  
PI Simpson AJG
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jyothi Mallajosyula on 2014-08-21
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Antibiotic production
Biotechnological
Energy production
Human Pathogen
Medical
Sequencing Center Brazilian Genome (Brazil)
Collaborating Institute
  
Funding Agency The Brazilian National Council for Scientific and Technological Development (CNPq) (Brazil)
Project Description
Tropical and subtropical environmental organism which produces the bacteriocidal pigment violacein  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
Wikipedia
Taxonomy
Database
  
Genome Publications Proceedings of the National Academy of Sciences of the United States of America The complete genome sequence of Chromobacterium violaceum reveals remarkable and exploitable bacterial adaptability.
Other Publications
  
PROJECT COMPOSITION
Studies Chromobacterium violaceum ATCC 12472
Analysis Projects Chromobacterium violaceum ATCC 12472
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
2-4kb inserts and cosmid libraries  
Number Of Reads
166700  
Read Size
  
Vector
  
GC Percent
65  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000613
Organism Name
Chromobacterium violaceum ATCC 12472  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-BETA  
Genus
Chromobacterium  
Genus Synonyms
  
Species
Chromobacterium violaceum  
Subspecies
  
Species Synonyms
  
Strain
ATCC 12472  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 12472  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.1959  
Exemplar Name
Chromobacterium violaceum  
Taxon DOI
10.1601/tx.1959  
Biosafety Level
2  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 243365
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Betaproteobacteria  
NCBI Order
Neisseriales  
NCBI Family
Chromobacteriaceae  
NCBI Genus
Chromobacterium  
NCBI Species
Chromobacterium violaceum  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Freshwater  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 6971
Genbank 16S ID M22510
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Sphere-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
25  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Diarrhea
Septicemia
Known Habitats Aquatic
Fresh water
Host
Soil
Metabolisms Volacein producer
Phenotypes Pathogen
Energy Sources
  
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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