PROJECT NAME
GOLD Project ID
Gp0000610  
Project Name
Photorhabdus luminescens laumondii TTO1  
Other Names
  
Legacy ER Project ID
10527  
Legacy GOLD ID
Gc00159  
NCBI BioProject Name Photorhabdus luminescens subsp. laumondii TTO1
NCBI BioProject ID 9605
NCBI BioProject Accession
PRJNA9605  
NCBI Locus Tag
plu  
NCBI BioSample Accession
SAMEA3138334  
PI Kunst F
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Insect Pathogen
Medical
Sequencing Center Institut Pasteur (France)
Collaborating Institute
  
Funding Agency National Institute for Agricultural Research (INRA) (France)
Institut Pasteur (France)
Centre National de la Recherche Scientifique (CNRS) (France)
Project Description
A nematode-symbiotic organism that kills other insects  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Wikipedia
Database
  
Genome Publications Nature biotechnology The genome sequence of the entomopathogenic bacterium Photorhabdus luminescens.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Photorhabdus luminescens laumondii TTO1
Analysis Projects Photorhabdus luminescens laumondii TTO1
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
1?2 kb, 2?3 kb, 5-10kb inserts and BAC libraries of 50-90kb inserts  
Number Of Reads
63475  
Read Size
  
Vector
pcDNA-2.1, pSYX34, pBeloBAC11  
GC Percent
43  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000610
Organism Name
Photorhabdus luminescens laumondii TTO1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Photorhabdus  
Genus Synonyms
  
Species
Photorhabdus luminescens  
Subspecies
laumondii  
Species Synonyms
  
Strain
TTO1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
CCM 7076  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.3260  
Exemplar Name
Photorhabdus luminescens laumondii  
Taxon DOI
10.1601/tx.3260  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 243265
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Enterobacteriales  
NCBI Family
Enterobacteriaceae  
NCBI Genus
Photorhabdus  
NCBI Species
Photorhabdus luminescens  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Animal  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 303432
Genbank 16S ID AY278646
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 1
Term Symbiotic
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
Heterorhabditis bacteriophora  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Septicemia
Toxemia
Known Habitats Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

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