PROJECT INFORMATION | |
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GOLD Project ID
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Gp0000610
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Project Name
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Photorhabdus laumondii TTO1
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Other Names
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Legacy ER Project ID
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10527
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Legacy GOLD ID
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Gc00159
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NCBI BioProject Name | Photorhabdus laumondii TTO1 |
NCBI BioProject ID
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9605 |
NCBI BioProject Accession
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PRJNA9605 |
NCBI Locus Tag
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plu
|
NCBI BioSample Accession
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SAMEA3138334 |
PI | Kunst F |
Added By |
Nikos Kyrpides
on 2007-11-27 |
Last Modified By |
Supratim Mukherjee
on 2018-06-20 |
Project Comments |
|
Project Status
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Complete and Published
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Project Relevance
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Insect Pathogen Biotechnological Medical |
Sequencing Center
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Institut Pasteur
(France)
|
Collaborating Institute
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|
Funding Agency
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Centre National de la Recherche Scientifique (CNRS)
(France)
Institut Pasteur (France) National Institute for Agricultural Research (INRA) (France) |
Project Description
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A nematode-symbiotic organism that kills other insects
|
Project Information Visibility
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Public |
PROJECT TYPE | |
Specimen
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Organism |
Nucleic Acid
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DNA |
Sequencing Strategy
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Whole Genome Sequencing
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EXTERNAL PROJECT LINKS | |
Project Information
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Database
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Genome Publications
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Nature biotechnology
The genome sequence of the entomopathogenic bacterium Photorhabdus luminescens.
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Other Publications
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PROJECT COMPOSITION | |
Study |
Photorhabdus luminescens laumondii TTO1 |
Organism |
Photorhabdus laumondii TTO1 |
Analysis Projects |
Photorhabdus laumondii TTO1 |
Number of Analysis Projects |
1 |
Number of DAPs |
0
|
SEQUENCING INFORMATION | |
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Sequencing Status
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Complete |
Sequencing Quality (MIGS-31) |
Level 6: Finished |
Finishing Goal
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Sequencing Comments
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Sequencing Technology
(MIGS-29)
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Sanger |
Library Method
(MIGS-28)
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1?2 kb, 2?3 kb, 5-10kb inserts and BAC libraries of 50-90kb inserts
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Number Of Reads
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63475
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Read Size
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Vector
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pcDNA-2.1, pSYX34, pBeloBAC11
|
GC Percent |
43
|
Chromosome Count |
1
|
Plasmid Count |
0
|
ORGANISM NAME | |
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GOLD Organism ID |
Go0000610 |
Organism Name |
Photorhabdus laumondii TTO1
|
Other names (alias, synonyms, short names, common names) |
Photorhabdus luminescens laumondii TTO1
|
Organism Domain |
BACTERIAL
|
Phylogeny |
PROTEOBACTERIA-GAMMA
|
Genus |
Photorhabdus
|
Genus Synonyms |
|
Species |
Photorhabdus laumondii
|
Subspecies |
|
Species Synonyms |
|
Strain |
TTO1
|
Strain Synonyms |
|
Serovar-Biovar |
|
Culture Collection ID |
CCM 7076
|
Type Strain |
Yes
|
Exemplar DOI |
10.1601/ex.3260
|
Exemplar Name |
Photorhabdus laumondii laumondii
|
Taxon DOI |
10.1601/tx.32000
|
Biosafety Level |
|
Organism Comments |
|
Cultured |
Yes
|
Culture Type |
Isolate
|
Organism Type |
Natural
|
Uncultured Type |
|
Commercial Strain |
|
Commercial Strain Comments |
|
ORGANISM TAXONOMY
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|
NCBI Taxonomy ID |
243265 |
NCBI Superkingdom |
Bacteria
|
NCBI Kingdom |
|
NCBI Phylum |
Proteobacteria
|
NCBI Class |
Gammaproteobacteria
|
NCBI Order |
Enterobacterales
|
NCBI Family |
Morganellaceae
|
NCBI Genus |
Photorhabdus
|
NCBI Species |
Photorhabdus laumondii
|
ISOLATION CLASSIFICATION | |
Ecosystem |
Host-associated
|
Ecosystem Category |
Animal
|
Ecosystem Type |
Unclassified
|
Ecosystem Subtype |
Unclassified
|
Specific Ecosystem |
Unclassified
|
ORGANISM EXTERNAL REFERENCES | |
Strain Info ID |
303432 |
Genbank 16S ID |
AY278646 |
GENERAL PROPERTIES | |
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Oxygen Requirement |
Facultative
|
Cell Shape |
Rod-shaped
|
Motility |
Motile
|
Sporulation |
Nonsporulating
|
Temperature Range |
Mesophile
|
Temperature Optimum |
|
Salinity |
|
pH |
|
Cell Diameter |
|
Cell Length |
|
Color |
|
Gram Staining |
Gram-
|
Biotic Relationships | Symbiotic |
Symbiotic Physical Interaction |
|
Symbiotic Relationship |
|
Symbiont Name |
Heterorhabditis bacteriophora
|
Symbiont Taxon ID |
|
Cell Arrangements |
|
Diseases |
Septicemia Toxemia |
Known Habitats |
Host |
Metabolisms |
|
Phenotypes |
Pathogen |
Energy Sources |
Heterotroph |
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