PROJECT NAME
GOLD Project ID
Gp0000598  
Project Name
Mycobacterium avium paratuberculosis K-10  
Other Names
  
Legacy ER Project ID
10517  
Legacy GOLD ID
Gc00169  
NCBI BioProject Name Mycobacterium avium subsp. paratuberculosis K-10
NCBI BioProject ID 91
NCBI BioProject Accession
PRJNA91  
NCBI Locus Tag
MAP  
NCBI BioSample Accession
SAMN02604086  
PI
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-05-20
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Animal Pathogen
Cattle Pathogen
Medical
Sequencing Center
  
Collaborating Institute University of Minnesota (USA)
Funding Agency U.S. Department of Agriculture (France)
Project Description
Causative agent of Johne's disease, or paratuberculosis, a chronic severe intestinal infection.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Johne's disease
Entrez
Wikipedia
Taxonomy
Database
  
Genome Publications Proceedings of the National Academy of Sciences of the United States of America The complete genome sequence of Mycobacterium avium subspecies paratuberculosis.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Mycobacterium avium paratuberculosis K-10
Analysis Projects Mycobacterium avium paratuberculosis K-10
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
1.8- to 3.0-kb inserts  
Number Of Reads
66129  
Read Size
  
Vector
  
GC Percent
69  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000598
Organism Name
Mycobacterium avium paratuberculosis K-10  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Mycobacterium  
Genus Synonyms
  
Species
Mycobacterium avium  
Subspecies
paratuberculosis  
Species Synonyms
  
Strain
K-10  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC BAA-968  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
2  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 262316
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinobacteria  
NCBI Order
Corynebacteriales  
NCBI Family
Mycobacteriaceae  
NCBI Genus
Mycobacterium  
NCBI Species
Mycobacterium avium  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Mammals  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Large intestine  
Specific Ecosystem
Fecal  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 501468
Genbank 16S ID
Synonym List
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
37  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases Enteritis
Johne's disease
Paratuberculosis
Known Habitats Feces
Gastrointestinal tract
Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources Chemoorganotroph

 

 

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