PROJECT NAME
GOLD Project ID
Gp0000594  
Project Name
Lactobacillus johnsonii NCC 533  
Other Names
  
Legacy ER Project ID
10515  
Legacy GOLD ID
Gc00171  
NCBI BioProject Name Lactobacillus johnsonii NCC 533
NCBI BioProject ID 9638
NCBI BioProject Accession
PRJNA9638  
NCBI Locus Tag
LJ  
NCBI BioSample Accession
SAMN02603676  
PI Pridmore RD
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Food industry
Sequencing Center
  
Collaborating Institute University of Georgia (USA)
North Carolina State University (USA)
Nestle Research Center (France)
Funding Agency Nestle Research Center (France)
Project Description
Human isolate that has immunomodulation properties and inhibits pathogens  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
Taxonomy
Database
  
Genome Publications Proceedings of the National Academy of Sciences of the United States of America The genome sequence of the probiotic intestinal bacterium Lactobacillus johnsonii NCC 533.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Lactobacillus johnsonii NCC 533
Analysis Projects Lactobacillus johnsonii NCC 533
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
35  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000594
Organism Name
Lactobacillus johnsonii NCC 533  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Lactobacillus  
Genus Synonyms
  
Species
Lactobacillus johnsonii  
Subspecies
  
Species Synonyms
  
Strain
NCC 533  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
NCC 533  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 257314
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Lactobacillaceae  
NCBI Genus
Lactobacillus  
NCBI Species
Lactobacillus johnsonii  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
25 - 35  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Chains
Diseases None
Known Habitats Host
Intestinal tract
Metabolisms
  
Phenotypes Probiotic
Energy Sources
  

 

 

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