PROJECT INFORMATION
GOLD Project ID
Gp0000587  
Project Name
Yersinia pestis bv. Microtus 91001  
Other Names
  
Legacy ER Project ID
10508  
Legacy GOLD ID
Gc00178  
NCBI BioProject Name Yersinia pestis biovar Microtus str. 91001
NCBI BioProject ID 10638
NCBI BioProject Accession PRJNA10638
NCBI Locus Tag
YP  
NCBI BioSample Accession SAMN02602970
PI
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
Project Status
Complete and Published  
Project Relevance Animal Pathogen
Biothreat
Human Pathogen
Medical
Sequencing Center Academy of Military Medical Sciences (AMMS), China China (China)
Collaborating Institute
  
Funding Agency
  
Project Description
Extremely virulent organism that causes plague  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information Wikipedia
Entrez
Taxonomy
Database
  
Genome Publications DNA research : an international journal for rapid publication of reports on genes and genomes Complete genome sequence of Yersinia pestis strain 91001, an isolate avirulent to humans.
Other Publications
  
PROJECT COMPOSITION
Study Yersinia pestis bv Microtus 91001
Analysis Projects Yersinia pestis bv. Microtus 91001
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
1.5 to 3 kb inserts  
Number Of Reads
84220  
Read Size
  
Vector
pUC18  
GC Percent
48  
Chromosome Count
1  
Plasmid Count
4  
ORGANISM NAME
GOLD Organism ID Go0000587
Organism Name
Yersinia pestis bv. Microtus 91001  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Yersinia  
Genus Synonyms
  
Species
Yersinia pestis  
Subspecies
  
Species Synonyms
  
Strain
91001  
Strain Synonyms
  
Serovar-Biovar
Microtus  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 229193
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Enterobacterales  
NCBI Family
Yersiniaceae  
NCBI Genus
Yersinia  
NCBI Species
Yersinia pestis  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
28 - 30  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases Bubonic plague
Known Habitats Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources Heterotroph

 

 

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