PROJECT INFORMATION
GOLD Project ID
Gp0000585  
Project Name
Leptospira interrogans sv. Copenhageni Fiocruz L1-130  
Other Names
  
Legacy ER Project ID
10506  
Legacy GOLD ID
Gc00180  
NCBI BioProject Name Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130
NCBI BioProject ID 10687
NCBI BioProject Accession PRJNA10687
NCBI Locus Tag
LIC  
NCBI BioSample Accession SAMN02603847
PI Nascimento, ALTO
Added By Nikos Kyrpides on 2007-11-27
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
Project Status
Complete and Published  
Project Relevance Animal Pathogen
Human Pathogen
Medical
Sequencing Center University of Sao Paulo (Brazil)
University of Campinas (Spain)
Collaborating Institute
  
Funding Agency The Brazilian National Council for Scientific and Technological Development (CNPq) (Brazil)
Sao Paulo Research Foundation (FAPESP) (Brazil)
Project Description
Causes leptospirosis  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information Wikipedia
Entrez
Leptospira
Taxonomy
Database
  
Genome Publications Journal of bacteriology Comparative genomics of two Leptospira interrogans serovars reveals novel insights into physiology and pathogenesis.
Other Publications
  
PROJECT COMPOSITION
Study Leptospira interrogans sv Copenhageni Fiocruz L1-130
Analysis Projects Leptospira interrogans sv. Copenhageni Fiocruz L1-130
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
0.8-2.0 kb,2.0-4.5 kb and cosmid library  
Number Of Reads
  
Read Size
  
Vector
pUC18, Lawrist  
GC Percent
35  
Chromosome Count
2  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000585
Organism Name
Leptospira interrogans sv. Copenhageni Fiocruz L1-130  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
SPIROCHAETES  
Genus
Leptospira  
Genus Synonyms
  
Species
Leptospira interrogans  
Subspecies
  
Species Synonyms
  
Strain
Fiocruz L1-130  
Strain Synonyms
  
Serovar-Biovar
Copenhageni  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 267671
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Spirochaetes  
NCBI Class
Spirochaetia  
NCBI Order
  
NCBI Family
Leptospiraceae  
NCBI Genus
Leptospira  
NCBI Species
Leptospira interrogans  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 692513
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Spiral-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
28 - 30  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Leptospirosis
Known Habitats Soil
Host
Fresh water
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

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