PROJECT NAME
GOLD Project ID
Gp0000574  
Project Name
Picrophilus torridus DSM 9790  
Other Names
  
Legacy ER Project ID
10496  
Legacy GOLD ID
Gc00190  
NCBI BioProject Name Picrophilus torridus DSM 9790
NCBI BioProject ID 10641
NCBI BioProject Accession
PRJNA10641  
NCBI Locus Tag
PTO  
NCBI BioSample Accession
SAMN02603345  
PI Liebl W
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Sequencing Center
  
Collaborating Institute University of Gottingen (Germany)
University of Gottingen (Germany)
ANRT (France)
Technical University of Hamburg
Funding Agency Federal Ministry of Education and Research (BMBF) (Germany)
Project Description
Thermoacidophilic organism that grows at extremes of temperature and pH  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
ArchaeaWeb
Wikipedia
Taxonomy
Database
  
Genome Publications Proceedings of the National Academy of Sciences of the United States of America Genome sequence of Picrophilus torridus and its implications for life around pH 0.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Picrophilus torridus DSM 9790
Analysis Projects Picrophilus torridus DSM 9790
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
2-3kb inserts  
Number Of Reads
25694  
Read Size
  
Vector
  
GC Percent
36  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000574
Organism Name
Picrophilus torridus DSM 9790  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-THERMOPLASMATA  
Genus
Picrophilus  
Genus Synonyms
  
Species
Picrophilus torridus  
Subspecies
  
Species Synonyms
  
Strain
DSM 9790  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 700027  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.367  
Exemplar Name
Picrophilus torridus  
Taxon DOI
10.1601/tx.367  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 263820
NCBI Kingdom
  
NCBI Phylum
Euryarchaeota  
NCBI Class
Thermoplasmata  
NCBI Order
Thermoplasmatales  
NCBI Family
Picrophilaceae  
NCBI Genus
Picrophilus  
NCBI Species
Picrophilus torridus  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Volcanic  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 117420
Genbank 16S ID AE017261:{470727-472195}
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Coccus-shaped  
Motility
  
Sporulation
  
Temperature Range
Thermophile  
Temperature Optimum
60  
Salinity
  
pH
0.7  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Soil
Metabolisms
  
Phenotypes Acidophile
Energy Sources Heterotroph

 

 

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