PROJECT NAME
GOLD Project ID
Gp0000556  
Project Name
Desulfotalea psychrophila LSv54  
Other Names
  
Legacy ER Project ID
10479  
Legacy GOLD ID
Gc00207  
NCBI BioProject Name Desulfotalea psychrophila LSv54
NCBI BioProject ID 12751
NCBI BioProject Accession
PRJNA12751  
NCBI Locus Tag
DP  
NCBI BioSample Accession
SAMEA3138217  
PI Amann R
Added By Nikos Kyrpides on 2007-11-27 00:00:00.0
Last Modified By Auto script update processes on 2014-03-26 00:00:00.0
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Carbon cycle
Environmental
Sequencing Center Epidauros Biotechnologie AG (Germany)
Collaborating Institute ANRT (France)
Funding Agency Federal Ministry of Education and Research (BMBF) (Germany)
Project Description
Marine sulfate-reducing anerobe  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information GNN_News
Entrez
Taxonomy
Database
  
Genome Publications Environmental microbiology The genome of Desulfotalea psychrophila, a sulfate-reducing bacterium from permanently cold Arctic sediments.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Desulfotalea psychrophila LSv54
Analysis Projects Desulfotalea psychrophila LSv54
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
1-2.5kb, 2.5-6kb inserts  
Number Of Reads
34078  
Read Size
  
Vector
pGEM-T, pGEM1-abi, pGEM2-abi  
GC Percent
47  
Chromosome Count
1  
Plasmid Count
2  
ORGANISM NAME
GOLD Organism ID Go0000556
Organism Name
Desulfotalea psychrophila LSv54  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-DELTA  
Genus
Desulfotalea  
Genus Synonyms
  
Species
Desulfotalea psychrophila  
Subspecies
  
Species Synonyms
  
Strain
LSv54  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 12343  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.3609  
Exemplar Name
Desulfotalea psychrophila  
Taxon DOI
10.1601/tx.3609  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 177439
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Deltaproteobacteria  
NCBI Order
Desulfobacterales  
NCBI Family
Desulfobulbaceae  
NCBI Genus
Desulfotalea  
NCBI Species
Desulfotalea psychrophila  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Oceanic  
Specific Ecosystem
Sediment  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 163127
Genbank 16S ID AF099062
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
  
Sporulation
  
Temperature Range
Psychrophile  
Temperature Optimum
10  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Marine
Sediment
Metabolisms Sulfate reducer
Phenotypes Sulfur cycle
Energy Sources
  

 

 

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