PROJECT NAME
GOLD Project ID
Gp0000507  
Project Name
Thermococcus kodakarensis KOD1  
Other Names
  
Legacy ER Project ID
10437  
Legacy GOLD ID
Gc00248  
NCBI BioProject Name Thermococcus kodakarensis KOD1
NCBI BioProject ID 13213
NCBI BioProject Accession
PRJNA13213  
NCBI Locus Tag
TK  
NCBI BioSample Accession
  
PI Fukui T
Added By Nikos Kyrpides on 2007-11-27 00:00:00.0
Last Modified By Auto script update processes on 2014-03-26 00:00:00.0
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Sequencing Center
  
Collaborating Institute ANRT (France)
Kyoto University
Funding Agency
  
Project Description
Hyperthermophilic archaeon  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Isolation
Entrez
Taxonomy
Database
  
Genome Publications Genome research Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Thermococcus kodakarensis KOD1
Analysis Projects Thermococcus kodakarensis KOD1
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
2 kb, 5 kb  
Number Of Reads
  
Read Size
  
Vector
pUC18  
GC Percent
52  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000507
Organism Name
Thermococcus kodakarensis KOD1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-THERMOCOCCI  
Genus
Thermococcus  
Genus Synonyms
  
Species
Thermococcus kodakarensis  
Subspecies
  
Species Synonyms
  
Strain
KOD1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC BAA-918  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.9404  
Exemplar Name
Thermococcus kodakarensis  
Taxon DOI
10.1601/tx.9404  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 69014
NCBI Kingdom
  
NCBI Phylum
Euryarchaeota  
NCBI Class
Thermococci  
NCBI Order
Thermococcales  
NCBI Family
Thermococcaceae  
NCBI Genus
Thermococcus  
NCBI Species
Thermococcus kodakarensis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Volcanic  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 387880
Genbank 16S ID D38650:{1-1498}
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Coccus-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Hyperthermophile  
Temperature Optimum
85  
Salinity
  
pH
5.8  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Hydrothermal vent
Metabolisms
  
Phenotypes
  
Energy Sources Heterotroph

 

 

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