PROJECT INFORMATION
GOLD Project ID
Gp0000501  
Project Name
Lactobacillus acidophilus NCFM  
Other Names
  
Legacy ER Project ID
10433  
Legacy GOLD ID
Gc00252  
NCBI BioProject Name Lactobacillus acidophilus NCFM
NCBI BioProject ID 82
NCBI BioProject Accession PRJNA82
NCBI Locus Tag
LBA  
NCBI BioSample Accession SAMN02603047
PI
Added By Nikos Kyrpides on 2007-11-27
Last Modified By JGI automated process on 2014-08-18
Project Comments
  
Project Status
Complete and Published  
Project Relevance Yogurt production
Food industry
Biotechnological
Sequencing Center State University of New York (USA)
ANRT (France)
Collaborating Institute
  
Funding Agency Dairy Management Inc (USA)
Project Description
Commercially available strain used for formula, yogurt, and fluid milk production  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information Wikipedia
Entrez
Taxonomy
Database
  
Genome Publications Proceedings of the National Academy of Sciences of the United States of America Complete genome sequence of the probiotic lactic acid bacterium Lactobacillus acidophilus NCFM.
Other Publications
  
PROJECT COMPOSITION
Study Lactobacillus acidophilus NCFM
Analysis Projects Lactobacillus acidophilus NCFM
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
35  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000501
Organism Name
Lactobacillus acidophilus NCFM  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Lactobacillus  
Genus Synonyms
  
Species
Lactobacillus acidophilus  
Subspecies
  
Species Synonyms
  
Strain
NCFM  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 700396  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 272621
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Lactobacillaceae  
NCBI Genus
Lactobacillus  
NCBI Species
Lactobacillus acidophilus  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 681603
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
45  
Salinity
  
pH
4 - 5  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Chains
Diseases None
Known Habitats Intestinal tract
Host
Oral cavity
Vagina
Metabolisms
  
Phenotypes Probiotic
Energy Sources
  

 

 

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