PROJECT NAME
GOLD Project ID
Gp0000484  
Project Name
Pseudomonas syringae pv. syringae B728a  
Other Names
  
Legacy ER Project ID
10421  
Legacy GOLD ID
Gc00264  
NCBI BioProject Name Pseudomonas syringae pv. syringae B728a
NCBI BioProject ID 323
NCBI BioProject Accession
PRJNA323  
NCBI Locus Tag
Psyr  
NCBI BioSample Accession
SAMN02604347  
PI Steven E. Lindow
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Agricultural
Plant Pathogen
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute University of California, Berkeley (USA)
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Causes plant rot  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Entrez
Wikipedia
Taxonomy
Database
  
Genome Publications Proceedings of the National Academy of Sciences of the United States of America Comparison of the complete genome sequences of Pseudomonas syringae pv. syringae B728a and pv. tomato DC3000.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Pseudomonas syringae B728a
Analysis Projects Pseudomonas syringae pv. syringae B728a
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
3 kb, 40 kb  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
59  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0004223
Organism Name
Pseudomonas syringae pv. syringae B728a  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Pseudomonas  
Genus Synonyms
  
Species
Pseudomonas syringae  
Subspecies
  
Species Synonyms
  
Strain
B728a  
Strain Synonyms
  
Serovar-Biovar
pv. syringae  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 205918
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Pseudomonadales  
NCBI Family
Pseudomonadaceae  
NCBI Genus
Pseudomonas  
NCBI Species
Pseudomonas syringae  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases Plant rot
Known Habitats Plants
Metabolisms
  
Phenotypes Pathogen
Energy Sources Heterotroph

 

 

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